Search Results

Mutant Information

Variant Information

Single base substitutions: 39

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	9208525	G-A	Homo
SBS	Chr1	20026652	C-A	Homo
SBS	Chr1	34919998	G-C	HET
SBS	Chr1	39833413	C-T	HET
SBS	Chr3	5098253	C-T	Homo
SBS	Chr3	22907941	A-T	HET
SBS	Chr3	24511142	T-A	HET
SBS	Chr3	32893619	G-C	Homo
SBS	Chr4	7324996	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g13220
SBS	Chr4	10657466	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g19190
SBS	Chr5	5038012	G-A	HET
SBS	Chr5	9424646	C-T	HET
SBS	Chr5	14268821	C-T	HET
SBS	Chr5	19648367	C-G	HET
SBS	Chr6	6908640	G-A	HET
SBS	Chr6	15753470	G-A	HET
SBS	Chr6	30388203	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g50190
SBS	Chr6	31124355	G-A	Homo
SBS	Chr7	6709455	A-G	HET
SBS	Chr7	16699783	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g28540
SBS	Chr7	17180513	G-A	HET
SBS	Chr7	18104029	A-G	HET
SBS	Chr7	19719253	C-T	HET
SBS	Chr7	21251409	A-G	HET
SBS	Chr8	21720002	C-G	HET
SBS	Chr8	26572554	C-A	HET
SBS	Chr9	5839359	G-A	HET
SBS	Chr9	9369421	G-A	HET
SBS	Chr9	18362967	C-T	Homo
SBS	Chr10	15942131	C-T	HET
SBS	Chr10	22649473	A-G	Homo
SBS	Chr11	4751276	G-C	Homo
SBS	Chr11	11395989	T-A	Homo
SBS	Chr11	13925178	G-T	Homo
SBS	Chr11	14918136	C-T	HET
SBS	Chr11	26337882	C-A	HET
SBS	Chr12	8028466	T-C	HET
SBS	Chr12	12810644	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g22690
SBS	Chr12	22554428	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g36780

Deletions: 23

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	1937366	1937377	11
Deletion	Chr8	4175729	4175734	5
Deletion	Chr6	4304988	4304990	2
Deletion	Chr6	5981612	5981614	2
Deletion	Chr12	8166198	8166202	4
Deletion	Chr7	9593394	9593395	1
Deletion	Chr9	9610829	9610830	1
Deletion	Chr9	9611124	9611137	13
Deletion	Chr3	13220853	13220855	2	LOC_Os03g22870
Deletion	Chr9	13475262	13475266	4	LOC_Os09g22300
Deletion	Chr6	13707370	13707377	7
Deletion	Chr11	13772370	13772377	7
Deletion	Chr10	14990856	14990857	1
Deletion	Chr2	15882418	15882423	5
Deletion	Chr12	17891911	17891917	6
Deletion	Chr10	19377101	19377115	14
Deletion	Chr2	20814655	20814657	2	LOC_Os02g34690
Deletion	Chr9	21220488	21220496	8
Deletion	Chr8	22907633	22907639	6	LOC_Os08g36340
Deletion	Chr7	25661139	25661141	2
Deletion	Chr1	26524193	26524217	24	LOC_Os01g46590
Deletion	Chr1	31510386	31510392	6
Deletion	Chr3	36067592	36067595	3

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr3	28928359	28928361	3	LOC_Os03g50660

No Inversion

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	390825	Chr5	10086180	LOC_Os10g01590
Translocation	Chr11	9540999	Chr3	31682825	2
Translocation	Chr11	9541127	Chr3	31680040

Main menu