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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1648150	A-T	HET
SBS	Chr1	21130955	T-G	HET
SBS	Chr11	10199521	T-C	HET
SBS	Chr11	15739419	G-A	Homo
SBS	Chr11	3154140	G-A	HET
SBS	Chr12	3651690	G-T	HET
SBS	Chr3	15642342	T-G	HET
SBS	Chr3	27675728	C-T	HET
SBS	Chr3	29514613	T-G	HET
SBS	Chr4	12446169	A-C	Homo
SBS	Chr4	27439286	G-A	Homo
SBS	Chr4	7553110	T-A	Homo
SBS	Chr5	13256073	T-C	Homo
SBS	Chr5	19890538	G-A	Homo
SBS	Chr5	27987526	C-T	Homo
SBS	Chr5	3983346	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os05g07470
SBS	Chr6	20251092	C-T	Homo
SBS	Chr6	29224750	A-G	Homo
SBS	Chr7	11644126	T-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g20164
SBS	Chr7	15417988	A-G	Homo
SBS	Chr7	399350	G-T	HET
SBS	Chr7	456654	G-A	Homo
SBS	Chr8	1432367	G-A	Homo
SBS	Chr8	24435829	C-A	Homo
SBS	Chr8	4467658	C-T	HET
SBS	Chr8	5420540	T-G	HET
SBS	Chr9	6896448	C-A	HET

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	3498211	3498222	11
Deletion	Chr5	4038957	4038958	1	LOC_Os05g07540
Deletion	Chr1	5290294	5290301	7
Deletion	Chr5	8255384	8255389	5
Deletion	Chr8	8282422	8282424	2
Deletion	Chr11	10156208	10156211	3
Deletion	Chr2	12661694	12661715	21
Deletion	Chr9	16841035	16841045	10
Deletion	Chr1	18403256	18403263	7
Deletion	Chr6	20552531	20552532	1
Deletion	Chr5	28163867	28163868	1
Deletion	Chr6	30896350	30896361	11

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	41834821	41834821	1
Insertion	Chr10	4529057	4529078	22
Insertion	Chr11	26996498	26996498	1
Insertion	Chr4	2067626	2067626	1
Insertion	Chr6	18659202	18659202	1
Insertion	Chr8	13064848	13064855	8
Insertion	Chr9	19325185	19325186	2

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	9763737	10187859

Translocations: 7

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	12561533	Chr5	25973987	2
Translocation	Chr7	12571624	Chr5	25973985	2
Translocation	Chr6	15405516	Chr4	31987837	2
Translocation	Chr11	16724475	Chr4	13537362
Translocation	Chr10	17328495	Chr2	34491495
Translocation	Chr6	18107113	Chr3	20000739	LOC_Os06g31170
Translocation	Chr2	35029103	Chr1	17623277	2

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