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Mutant Information

Variant Information

Single base substitutions: 26

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	24201692	C-T	HET
SBS	Chr2	26428330	G-A	HET
SBS	Chr2	32739275	T-G	HET
SBS	Chr3	1407447	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os03g03280
SBS	Chr3	3124662	C-A	HET
SBS	Chr3	13201411	C-T	Homo
SBS	Chr3	25915777	G-A	HET
SBS	Chr4	7795480	C-T	Homo
SBS	Chr4	17410509	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g29330
SBS	Chr4	24366768	G-A	HET
SBS	Chr4	29540442	G-A	HET
SBS	Chr5	6519464	T-A	Homo
SBS	Chr6	15879775	G-A	HET
SBS	Chr6	25969337	A-G	HET
SBS	Chr7	28347063	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os07g47410
SBS	Chr8	7388332	G-A	Homo
SBS	Chr9	20484989	G-T	HET
SBS	Chr9	20666369	G-A	HET
SBS	Chr10	9550707	T-A	Homo
SBS	Chr10	13989708	A-T	Homo
SBS	Chr10	13989709	T-A	Homo
SBS	Chr11	9325444	A-T	HET
SBS	Chr11	17194958	A-G	HET
SBS	Chr11	18298417	G-A	HET
SBS	Chr12	4955176	G-A	HET
SBS	Chr12	5590169	C-T	HET

Deletions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	1445164	1445168	4
Deletion	Chr5	2210001	2232000	21999	5
Deletion	Chr5	2244001	2272000	27999	4
Deletion	Chr5	2284001	2305000	20999	LOC_Os05g04810
Deletion	Chr4	6292557	6292558	1
Deletion	Chr3	6498001	6518000	19999	4
Deletion	Chr5	8854001	8892000	37999	10
Deletion	Chr5	8897001	8968000	70999	12
Deletion	Chr8	9744489	9744490	1
Deletion	Chr12	10239205	10239217	12
Deletion	Chr7	10542340	10542345	5
Deletion	Chr7	17722001	17735000	12999	3
Deletion	Chr1	22567184	22567195	11	LOC_Os01g40010
Deletion	Chr1	25837001	25939000	101999	15
Deletion	Chr1	25941001	26020000	78999	12
Deletion	Chr2	28970426	28970435	9
Deletion	Chr4	33545854	33545859	5

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	1825758	1825758	1
Insertion	Chr10	8280328	8280328	1
Insertion	Chr11	14925446	14925446	1
Insertion	Chr12	5609530	5609531	2

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	12195640	12216381	2
Inversion	Chr12	12601408	12634953
Inversion	Chr7	16565309	16567394
Inversion	Chr7	17734710	17735682	LOC_Os07g30070

Translocations: 10

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	316842	Chr3	16770706
Translocation	Chr8	6527251	Chr4	1143462
Translocation	Chr10	10939279	Chr7	16567373	LOC_Os10g21360
Translocation	Chr12	11335341	Chr9	11467145	LOC_Os12g19490
Translocation	Chr12	11336591	Chr9	11467149
Translocation	Chr4	11340672	Chr1	25907670
Translocation	Chr8	16707233	Chr3	18172603	LOC_Os08g27360
Translocation	Chr10	23012478	Chr1	3698678	2
Translocation	Chr10	23013128	Chr1	3698670	2
Translocation	Chr11	27005713	Chr2	15294603

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