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Mutant Information

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	33655459	T-C	HET
SBS	Chr1	41173841	G-A	HET
SBS	Chr10	10320087	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g20480
SBS	Chr10	14866270	G-A	Homo
SBS	Chr10	1839302	T-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g04020
SBS	Chr10	3368635	A-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g06550
SBS	Chr12	16051972	A-T	HET
SBS	Chr12	318131	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g01520
SBS	Chr12	8761766	C-T	HET
SBS	Chr2	15187581	C-T	HET
SBS	Chr2	25062878	C-G	HET
SBS	Chr2	30897063	T-C	Homo
SBS	Chr2	6198671	C-T	HET
SBS	Chr3	13139461	C-T	HET
SBS	Chr3	34334075	G-T	HET
SBS	Chr4	13564858	G-A	Homo
SBS	Chr5	16016140	G-C	Homo
SBS	Chr5	17857502	C-T	Homo
SBS	Chr5	5174689	C-T	HET
SBS	Chr5	6181493	C-A	HET
SBS	Chr6	28534599	A-T	HET
SBS	Chr6	5427514	G-A	Homo
SBS	Chr7	13832977	G-A	Homo
SBS	Chr7	382305	A-G	HET
SBS	Chr7	382306	G-T	HET
SBS	Chr7	491621	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g01830
SBS	Chr8	13036320	T-A	HET
SBS	Chr8	18188531	G-A	HET
SBS	Chr8	22834324	T-A	HET

Deletions: 10

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	867001	886000	18999	4
Deletion	Chr1	9496075	9496080	5
Deletion	Chr7	10717170	10717171	1
Deletion	Chr10	13914964	13914965	1
Deletion	Chr4	14903635	14903650	15
Deletion	Chr12	23638034	23638048	14
Deletion	Chr1	25965001	26023000	57999	8
Deletion	Chr4	27779396	27779399	3
Deletion	Chr4	28278665	28278880	215	LOC_Os04g47650
Deletion	Chr1	41662961	41662975	14

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr6	5336096	5336097	2

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	664690	867067	LOC_Os11g02320
Inversion	Chr1	3671840	3879922	2
Inversion	Chr1	3671853	3879927	2
Inversion	Chr8	6368090	6940213	LOC_Os08g10810
Inversion	Chr9	16082652	16274224	2
Inversion	Chr9	16082662	16274232	2

Translocations: 9

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	3639617	Chr5	4157605
Translocation	Chr10	5651962	Chr8	3463801	2
Translocation	Chr5	5767515	Chr1	6544940
Translocation	Chr10	8466785	Chr3	6788151	2
Translocation	Chr8	9703302	Chr6	18191609
Translocation	Chr5	15265190	Chr1	18684064	2
Translocation	Chr6	15401518	Chr1	16530854	2
Translocation	Chr4	17221223	Chr3	25790868
Translocation	Chr10	18184211	Chr1	24311719

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