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Mutant Information

Variant Information

Single base substitutions: 26

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1583187	A-T	HET
SBS	Chr1	26772652	G-T	HET
SBS	Chr1	29836469	A-C	Homo
SBS	Chr1	32603517	C-G	Homo
SBS	Chr11	13073744	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os11g22720
SBS	Chr11	13303999	A-T	HET
SBS	Chr12	13584175	T-C	HET
SBS	Chr12	26835069	G-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os12g43230
SBS	Chr12	8312248	T-A	Homo
SBS	Chr12	9489769	C-T	HET
SBS	Chr2	25197926	C-A	Homo
SBS	Chr2	25220339	A-C	Homo
SBS	Chr3	11015898	C-T	Homo
SBS	Chr4	11336994	A-G	Homo
SBS	Chr4	12487031	G-A	Homo
SBS	Chr4	20481244	G-A	Homo
SBS	Chr4	30851457	G-A	Homo
SBS	Chr5	16940060	T-C	Homo
SBS	Chr5	9164624	T-G	HET
SBS	Chr6	17144914	A-G	HET
SBS	Chr6	3721829	G-T	Homo
SBS	Chr6	9646170	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os06g16720
SBS	Chr7	18953343	T-A	HET
SBS	Chr7	5969563	T-C	HET
SBS	Chr8	17197044	T-C	HET
SBS	Chr9	6656901	G-A	HET

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	49552	49554	2
Deletion	Chr11	7760001	7808000	47999	8
Deletion	Chr2	8888674	8888675	1
Deletion	Chr7	12140275	12140276	1
Deletion	Chr7	12155725	12155726	1
Deletion	Chr1	13066033	13066034	1
Deletion	Chr10	13860744	13860745	1
Deletion	Chr12	15689001	15945000	255999	42
Deletion	Chr12	16017001	16044000	26999	4
Deletion	Chr12	16054001	16181000	126999	15
Deletion	Chr12	16191001	16264000	72999	12
Deletion	Chr12	16273001	16603000	329999	45
Deletion	Chr12	16647001	16758000	110999	15
Deletion	Chr1	20181202	20181203	1
Deletion	Chr1	32131324	32131332	8

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	3923863	3923863	1
Insertion	Chr11	27830603	27830606	4
Insertion	Chr2	1506900	1506928	29
Insertion	Chr5	21998763	21998763	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	10976303	11590776	2
Inversion	Chr12	10977328	11797550	2
Inversion	Chr8	16676983	16861535	LOC_Os08g27310
Inversion	Chr8	16676990	16861548	LOC_Os08g27310
Inversion	Chr6	17165038	17827480

Translocations: 14

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	1494792	Chr5	22775554
Translocation	Chr7	1494795	Chr5	22776002
Translocation	Chr11	3788917	Chr4	16564819	2
Translocation	Chr11	3788930	Chr4	16566611	LOC_Os11g07470
Translocation	Chr12	4365663	Chr2	30232419	2
Translocation	Chr9	6936771	Chr1	3000538	2
Translocation	Chr11	9428914	Chr4	696943	LOC_Os11g17014
Translocation	Chr12	11590841	Chr11	1452100	LOC_Os12g19900
Translocation	Chr12	11796961	Chr11	1452079	LOC_Os12g20220
Translocation	Chr11	18380110	Chr5	16725007	2
Translocation	Chr4	19145355	Chr3	17622042	2
Translocation	Chr11	19199011	Chr8	15172260	LOC_Os11g32530
Translocation	Chr11	19859161	Chr7	16610234	LOC_Os11g33970
Translocation	Chr4	25989079	Chr2	22516882

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