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Mutant Information

Variant Information

Single base substitutions: 21

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr10	22733649	G-T	HET
SBS	Chr10	8979704	C-G	HET
SBS	Chr12	24913138	T-A	Homo
SBS	Chr2	14449446	G-A	HET
SBS	Chr2	25788480	G-A	HET
SBS	Chr2	33791379	C-T	HET
SBS	Chr3	15380772	C-T	HET
SBS	Chr3	18536501	C-G	HET
SBS	Chr3	35873303	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g63500
SBS	Chr3	4100666	T-C	HET
SBS	Chr4	15874050	G-T	HET
SBS	Chr5	17227409	A-T	HET
SBS	Chr5	22683785	T-C	HET
SBS	Chr5	24406147	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os05g41720
SBS	Chr5	8250434	C-T	HET
SBS	Chr5	8298303	T-A	HET
SBS	Chr6	16188849	G-A	HET
SBS	Chr6	26449387	T-C	HET
SBS	Chr7	13238085	T-A	HET
SBS	Chr7	28384521	G-A	HET
SBS	Chr9	1134777	G-T	HET	STOP_GAINED	LOC_Os09g02630

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	1134150	1134154	4
Deletion	Chr1	4473716	4473717	1
Deletion	Chr8	8194470	8194472	2
Deletion	Chr11	11725375	11725376	1	LOC_Os11g20290
Deletion	Chr3	14807513	14807516	3
Deletion	Chr12	15540968	15540969	1
Deletion	Chr1	16604566	16604568	2
Deletion	Chr7	17111742	17111743	1
Deletion	Chr5	20357940	20357941	1
Deletion	Chr9	21442116	21442151	35	LOC_Os09g37170
Deletion	Chr1	25233714	25233715	1
Deletion	Chr5	25494001	25510000	15999	3

Insertions: 11

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	35934243	35934243	1
Insertion	Chr10	14861304	14861304	1
Insertion	Chr2	9396604	9396604	1
Insertion	Chr3	10745204	10745204	1
Insertion	Chr3	21463072	21463073	2
Insertion	Chr3	34863825	34863825	1
Insertion	Chr4	26976581	26976582	2
Insertion	Chr5	11924539	11924539	1
Insertion	Chr5	16128616	16128617	2
Insertion	Chr5	9992062	9992063	2
Insertion	Chr8	12575994	12575994	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	10984075	11905022	2

Translocations: 8

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr3	8412205	Chr1	17229629	LOC_Os03g15370
Translocation	Chr6	8501843	Chr5	12027484	2
Translocation	Chr7	9894187	Chr3	13495206	2
Translocation	Chr8	9911837	Chr1	19823117
Translocation	Chr11	22131384	Chr6	15401474
Translocation	Chr11	24005113	Chr2	8611396	LOC_Os11g40249
Translocation	Chr11	26952279	Chr3	34241378	2
Translocation	Chr12	27020838	Chr10	21612997	2

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