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Mutant Information

Variant Information

Single base substitutions: 37

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	38374453	C-T	Homo
SBS	Chr10	12671819	G-A	HET
SBS	Chr10	13193180	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g25502
SBS	Chr10	14204352	C-T	Homo
SBS	Chr10	16454233	C-T	Homo
SBS	Chr10	16780956	G-A	HET
SBS	Chr10	20163385	C-T	HET
SBS	Chr10	6977879	A-T	HET
SBS	Chr10	9214043	G-T	Homo
SBS	Chr11	24237317	T-A	HET
SBS	Chr11	5848982	G-T	HET
SBS	Chr12	14812548	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g25590
SBS	Chr2	19939390	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os02g33530
SBS	Chr2	20706831	G-A	HET
SBS	Chr2	4442345	A-G	Homo
SBS	Chr2	4984085	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g09690
SBS	Chr2	6979071	T-C	HET
SBS	Chr3	14413091	C-T	Homo
SBS	Chr3	3837601	G-A	HET
SBS	Chr4	21029768	C-T	HET
SBS	Chr4	26360041	C-T	Homo
SBS	Chr5	10245185	T-C	HET
SBS	Chr5	26546273	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g45830
SBS	Chr5	5379369	C-T	Homo
SBS	Chr5	5480419	T-G	HET
SBS	Chr5	8097485	G-A	HET
SBS	Chr6	14236991	T-G	HET
SBS	Chr6	26741160	T-A	HET
SBS	Chr7	23275591	A-T	HET
SBS	Chr7	25929011	T-C	HET
SBS	Chr8	10430910	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os08g17030
SBS	Chr8	11095552	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os08g18100
SBS	Chr8	27483055	T-A	Homo
SBS	Chr8	5592491	C-T	Homo
SBS	Chr8	7970379	T-C	Homo
SBS	Chr9	22310780	T-A	HET
SBS	Chr9	22573467	A-G	HET

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	2215589	2215592	3
Deletion	Chr3	2618150	2618154	4	LOC_Os03g05340
Deletion	Chr4	7422845	7422852	7
Deletion	Chr3	8177368	8177374	6
Deletion	Chr10	9226995	9227007	12
Deletion	Chr9	9912001	9951000	38999	6
Deletion	Chr12	10741214	10741217	3
Deletion	Chr7	12205475	12205476	1
Deletion	Chr12	12298698	12298705	7
Deletion	Chr4	20330687	20330688	1
Deletion	Chr4	24890251	24890273	22	LOC_Os04g42020
Deletion	Chr6	25427183	25427189	6
Deletion	Chr2	25880374	25880379	5
Deletion	Chr7	25896033	25896038	5
Deletion	Chr2	32522388	32522390	2

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	19355837	19355837	1
Insertion	Chr11	10820035	10820035	1
Insertion	Chr2	34287786	34287789	4
Insertion	Chr4	26874681	26874682	2
Insertion	Chr6	5718480	5718481	2
Insertion	Chr9	8348239	8348239	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	37881486	38374213	LOC_Os01g65290
Inversion	Chr1	37881491	38374214	LOC_Os01g65290

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	3694488	Chr4	3213549
Translocation	Chr11	5131077	Chr8	2543639	LOC_Os11g09590
Translocation	Chr10	5409395	Chr8	7387144	2
Translocation	Chr6	10177700	Chr2	13594366
Translocation	Chr5	14745440	Chr2	22741231

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