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Mutant Information

Variant Information

Single base substitutions: 22

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	18018899	G-T	Homo
SBS	Chr1	20868112	G-T	HET
SBS	Chr10	13584174	A-G	Homo
SBS	Chr10	5463966	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os10g10040
SBS	Chr11	9656766	C-T	HET
SBS	Chr2	20338109	C-T	Homo
SBS	Chr2	20455357	A-T	Homo
SBS	Chr2	4353368	G-A	HET
SBS	Chr3	29485387	C-A	HET
SBS	Chr3	6460637	T-A	HET
SBS	Chr3	7572143	C-T	HET
SBS	Chr3	9675431	C-A	HET
SBS	Chr4	11009690	C-T	HET
SBS	Chr4	13106903	T-C	HET
SBS	Chr4	26011238	A-G	HET
SBS	Chr4	30961016	C-G	HET
SBS	Chr5	11558713	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os05g19850
SBS	Chr5	19395763	C-A	HET
SBS	Chr7	1546949	T-C	Homo
SBS	Chr7	25823855	C-T	Homo
SBS	Chr8	28114417	A-C	Homo
SBS	Chr9	598369	A-G	HET

Deletions: 6

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr1	8462859	8462864	5
Deletion	Chr2	19994656	19994660	4
Deletion	Chr5	20693500	20693517	17
Deletion	Chr8	27282521	27282524	3
Deletion	Chr3	29048626	29048628	2
Deletion	Chr4	34703350	34703355	5	LOC_Os04g58300

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	36428451	36428453	3
Insertion	Chr12	18817390	18817390	1
Insertion	Chr6	11827213	11827213	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	1403829	1404125
Inversion	Chr3	6405177	7349601	2
Inversion	Chr3	6405189	6457198	LOC_Os03g12210
Inversion	Chr3	6438641	6457191
Inversion	Chr3	6438653	7349603	2

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	19008901	Chr4	11551033

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