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Mutant Information

Variant Information

Single base substitutions: 22

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	19644275	T-G	HET
SBS	Chr1	33291955	T-A	HET
SBS	Chr11	12563884	G-T	HET
SBS	Chr12	24660031	T-C	HET
SBS	Chr12	24759784	G-A	HET
SBS	Chr12	25660636	T-A	HET
SBS	Chr12	26339484	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os12g42380
SBS	Chr2	10015821	A-T	HET
SBS	Chr2	12260682	C-T	Homo
SBS	Chr2	33892551	T-C	Homo
SBS	Chr3	20084329	G-A	HET
SBS	Chr4	33351127	C-T	Homo
SBS	Chr4	8282399	G-T	HET
SBS	Chr4	8282400	A-T	HET
SBS	Chr5	12557782	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g21230
SBS	Chr5	12557942	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g21230
SBS	Chr5	16006237	G-A	Homo
SBS	Chr5	9214132	A-C	Homo
SBS	Chr6	11821588	C-T	HET
SBS	Chr7	13897092	T-G	HET
SBS	Chr9	20444524	C-T	Homo
SBS	Chr9	528563	G-C	HET

Deletions: 6

Variant Type	Chromosome	Start	End	Size (bp)
Deletion	Chr9	680819	680820	1
Deletion	Chr11	2103747	2103748	1
Deletion	Chr5	3869332	3869335	3
Deletion	Chr3	13349478	13349480	2
Deletion	Chr3	25282698	25282703	5
Deletion	Chr6	30342978	30342986	8

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	4529057	4529078	22
Insertion	Chr12	14707550	14707550	1
Insertion	Chr12	15197681	15197684	4
Insertion	Chr5	12037281	12037281	1
Insertion	Chr8	12052178	12052178	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	33376867	33377085	LOC_Os03g58600

Translocations: 15

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	3300704	Chr3	25496604	LOC_Os11g06760
Translocation	Chr11	3300717	Chr3	25494335	LOC_Os11g06760
Translocation	Chr3	4570259	Chr2	21627896	LOC_Os03g08834
Translocation	Chr9	6281204	Chr6	20090155
Translocation	Chr11	13220796	Chr5	3174507
Translocation	Chr8	15145131	Chr6	27239857	LOC_Os08g24980
Translocation	Chr12	17985091	Chr2	20089984
Translocation	Chr12	17985559	Chr2	20089991
Translocation	Chr12	19376806	Chr1	13934731	2
Translocation	Chr11	20365054	Chr10	16708055	2
Translocation	Chr5	20367562	Chr3	16525221	2
Translocation	Chr11	20367659	Chr10	16707404	2
Translocation	Chr9	21193901	Chr1	42872721
Translocation	Chr9	21193903	Chr1	42879728	2
Translocation	Chr12	24881478	Chr5	12422012	2

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