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Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	2095734	G-C	HET
SBS	Chr1	24577206	G-A	HET
SBS	Chr1	27605111	G-A	HET
SBS	Chr1	30377657	C-T	Homo
SBS	Chr1	35293651	G-A	Homo
SBS	Chr1	37753699	G-T	Homo
SBS	Chr1	40393028	A-G	HET
SBS	Chr1	40446718	G-T	HET
SBS	Chr1	9782928	A-G	HET
SBS	Chr11	11166831	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os11g19420
SBS	Chr11	26620581	C-T	Homo
SBS	Chr11	7430249	G-A	Homo
SBS	Chr12	10578002	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g18320
SBS	Chr12	21622407	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g35560
SBS	Chr12	3683515	G-A	HET
SBS	Chr12	8859919	G-A	HET
SBS	Chr2	19558608	G-T	HET
SBS	Chr2	34785302	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g56740
SBS	Chr3	12869018	G-A	Homo
SBS	Chr3	13142825	C-G	Homo
SBS	Chr3	32731391	G-A	HET
SBS	Chr4	15111408	C-T	Homo
SBS	Chr5	14598178	C-T	HET
SBS	Chr5	18178741	G-A	HET
SBS	Chr5	23770733	A-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g40470
SBS	Chr6	16800978	A-T	Homo
SBS	Chr7	11119572	C-T	HET
SBS	Chr7	23874043	C-G	HET
SBS	Chr7	24101151	T-G	HET
SBS	Chr7	8319229	A-G	HET
SBS	Chr8	6738620	C-T	HET

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	1127932	1127939	7
Deletion	Chr1	2354066	2354071	5
Deletion	Chr11	7428730	7428731	1	LOC_Os11g13540
Deletion	Chr11	10623321	10623330	9
Deletion	Chr9	11149782	11149783	1	LOC_Os09g18190
Deletion	Chr7	13871178	13871182	4
Deletion	Chr4	14633430	14633436	6
Deletion	Chr6	18388060	18388061	1
Deletion	Chr11	18789871	18789879	8
Deletion	Chr3	19435114	19435124	10
Deletion	Chr8	19868411	19868412	1
Deletion	Chr4	20618945	20618950	5
Deletion	Chr5	25540097	25540115	18
Deletion	Chr6	29396167	29396169	2
Deletion	Chr4	33888844	33888848	4	LOC_Os04g56850

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	25296082	25296083	2
Insertion	Chr3	29320960	29320965	6
Insertion	Chr7	7104360	7104360	1
Insertion	Chr9	17293585	17293586	2
Insertion	Chr9	5748486	5748486	1

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	10064012	10198786	2
Inversion	Chr12	20330330	20989144	2
Inversion	Chr3	35332111	35332212	LOC_Os03g62370

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	4933654	Chr7	6427414	2
Translocation	Chr8	10668730	Chr6	18881069	2
Translocation	Chr8	11964848	Chr7	18053949	LOC_Os08g19980

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