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Mutant Information

Variant Information

Single base substitutions: 34

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	25103373	G-A	Homo
SBS	Chr1	25247238	A-T	Homo
SBS	Chr1	3393632	G-A	HET
SBS	Chr1	4478861	G-A	HET
SBS	Chr1	578729	C-T	HET
SBS	Chr10	16030529	G-T	HET
SBS	Chr11	6005837	G-A	HET
SBS	Chr12	14572267	G-T	HET
SBS	Chr12	14572268	A-C	HET
SBS	Chr12	17409927	G-A	HET
SBS	Chr12	3767365	T-C	Homo
SBS	Chr2	24962782	G-A	HET
SBS	Chr2	31590181	G-A	HET
SBS	Chr2	32640447	T-G	HET
SBS	Chr3	24070224	C-T	Homo
SBS	Chr3	31237737	C-T	Homo
SBS	Chr4	12191560	A-C	HET
SBS	Chr4	27632645	C-T	HET
SBS	Chr4	7579332	C-T	HET
SBS	Chr5	1413048	G-C	HET
SBS	Chr5	24700223	C-T	HET
SBS	Chr6	22098071	C-T	HET
SBS	Chr6	30941899	C-T	Homo
SBS	Chr7	13497752	C-T	Homo
SBS	Chr7	14902137	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g25970
SBS	Chr7	20750580	G-C	Homo
SBS	Chr7	20783800	G-A	Homo
SBS	Chr7	24018893	A-G	Homo
SBS	Chr7	28272698	G-C	Homo
SBS	Chr7	7828659	G-A	Homo
SBS	Chr8	11058103	T-A	HET
SBS	Chr8	25291107	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os08g39910
SBS	Chr8	26628734	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os08g42140
SBS	Chr8	7044833	G-C	HET

Deletions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	1185889	1185892	3
Deletion	Chr12	2288287	2288298	11
Deletion	Chr7	4302001	4313000	10999	3
Deletion	Chr6	4327486	4327494	8
Deletion	Chr10	7209709	7209769	60	LOC_Os10g13350
Deletion	Chr1	10424099	10424100	1
Deletion	Chr1	13123669	13123676	7
Deletion	Chr6	15785001	15796000	10999	2
Deletion	Chr6	18273627	18273628	1
Deletion	Chr1	20181202	20181203	1
Deletion	Chr7	21050375	21050376	1
Deletion	Chr1	21384075	21384089	14
Deletion	Chr4	22014135	22014136	1
Deletion	Chr9	22493141	22493142	1
Deletion	Chr2	24196828	24196833	5
Deletion	Chr2	25105805	25105812	7
Deletion	Chr3	28811875	28811878	3

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr2	9244220	9244223	4
Insertion	Chr6	5487850	5487857	8
Insertion	Chr7	20029673	20029673	1
Insertion	Chr9	18478348	18478348	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	41140226	41521773	LOC_Os01g71080

Translocations: 12

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	4910767	Chr8	24407377
Translocation	Chr11	5470417	Chr3	14329190
Translocation	Chr11	5470425	Chr3	14360282	2
Translocation	Chr10	8060214	Chr5	16540433	2
Translocation	Chr10	12860090	Chr2	16818187	LOC_Os10g24980
Translocation	Chr12	15521843	Chr11	675158	2
Translocation	Chr12	20502890	Chr4	2086082
Translocation	Chr6	23465790	Chr4	20897001
Translocation	Chr7	24843741	Chr6	29094877
Translocation	Chr11	27843793	Chr6	22525979	2
Translocation	Chr11	28092414	Chr7	21747242
Translocation	Chr3	33248030	Chr1	18688436	2

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