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Mutant Information

Variant Information

Single base substitutions: 26

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	15023299	G-A	Homo
SBS	Chr1	3966127	T-A	HET
SBS	Chr1	4422715	C-T	HET
SBS	Chr1	554380	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os01g02040
SBS	Chr11	27332064	G-A	HET
SBS	Chr12	24269413	C-A	Homo
SBS	Chr12	5468848	C-T	HET
SBS	Chr2	15196037	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g25900
SBS	Chr2	18476139	C-T	HET
SBS	Chr2	32176460	C-T	Homo
SBS	Chr2	35222204	G-A	Homo
SBS	Chr2	35459676	G-T	HET
SBS	Chr2	35853611	A-G	Homo
SBS	Chr3	29998917	T-A	Homo
SBS	Chr4	20648675	G-T	Homo
SBS	Chr4	6658420	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g12100
SBS	Chr5	16703382	A-G	HET
SBS	Chr5	27548683	G-A	Homo
SBS	Chr5	8901117	C-G	HET
SBS	Chr6	11873596	C-T	HET
SBS	Chr6	28417363	G-A	HET
SBS	Chr7	28002985	T-C	HET
SBS	Chr7	4513630	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os07g08770
SBS	Chr8	22986445	C-T	HET
SBS	Chr8	8300429	T-A	HET
SBS	Chr9	19211932	G-T	HET

Deletions: 9

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	1011890	1011891	1
Deletion	Chr6	10664354	10664355	1
Deletion	Chr10	13722556	13722559	3
Deletion	Chr10	14213580	14213581	1
Deletion	Chr10	15197592	15197596	4
Deletion	Chr12	18136776	18136777	1	LOC_Os12g30214
Deletion	Chr1	21640003	21640005	2
Deletion	Chr12	26527496	26527499	3	LOC_Os12g42690
Deletion	Chr5	28899765	28899775	10

Insertions: 11

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr10	7670349	7670349	1
Insertion	Chr11	26430982	26431055	74
Insertion	Chr12	14044985	14044985	1
Insertion	Chr2	9396604	9396604	1
Insertion	Chr4	9530143	9530143	1
Insertion	Chr5	11898000	11898000	1
Insertion	Chr5	12758792	12758792	1
Insertion	Chr6	19659864	19659865	2
Insertion	Chr7	11919344	11919344	1	LOC_Os07g20620
Insertion	Chr8	12235559	12235559	1
Insertion	Chr8	14246253	14246253	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	8754630	8899447
Inversion	Chr5	8758986	8899581
Inversion	Chr7	13061163	13061554	LOC_Os07g23169
Inversion	Chr7	20945178	21121614	2
Inversion	Chr7	20945207	20967981	LOC_Os07g34964

Translocations: 14

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	731349	Chr11	689191
Translocation	Chr6	957338	Chr4	2437156	2
Translocation	Chr8	3765042	Chr1	4782004	2
Translocation	Chr3	6786988	Chr1	14175791	2
Translocation	Chr5	7502543	Chr3	16768906
Translocation	Chr12	10779849	Chr2	19373249
Translocation	Chr11	14496445	Chr4	3486943
Translocation	Chr12	16758612	Chr3	28068129	LOC_Os12g28340
Translocation	Chr4	17832031	Chr2	12837075
Translocation	Chr10	18183928	Chr7	21127497
Translocation	Chr10	18189773	Chr9	1515999	LOC_Os10g34078
Translocation	Chr10	18195122	Chr9	3016436	2
Translocation	Chr8	19395664	Chr7	13123876	2
Translocation	Chr8	21330785	Chr7	21127500

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