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Mutant Information

Variant Information

Single base substitutions: 46

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	14533779	G-A	HET
SBS	Chr1	17129692	A-C	HET
SBS	Chr1	21595702	C-A	Homo
SBS	Chr1	26542707	G-A	HET
SBS	Chr1	30305796	C-G	HET
SBS	Chr1	32747907	A-G	HET
SBS	Chr1	42137101	C-A	HET
SBS	Chr1	6772139	T-C	HET
SBS	Chr10	14813865	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g28470
SBS	Chr10	690751	T-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g02100
SBS	Chr10	690752	C-T	Homo
SBS	Chr10	8077406	T-C	Homo
SBS	Chr11	21421525	T-C	HET
SBS	Chr11	22118564	C-T	HET
SBS	Chr11	22729374	G-A	Homo
SBS	Chr12	10757218	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g18630
SBS	Chr12	10757219	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os12g18630
SBS	Chr12	14057874	G-A	HET
SBS	Chr12	21613480	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g35540
SBS	Chr12	8378194	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g14650
SBS	Chr2	17600540	T-C	Homo
SBS	Chr2	17667435	G-A	Homo
SBS	Chr2	17667436	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g29680
SBS	Chr3	10161451	G-T	Homo
SBS	Chr3	20234888	G-T	HET
SBS	Chr3	32509759	A-G	HET
SBS	Chr4	11921664	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g21180
SBS	Chr4	23681370	A-G	Homo
SBS	Chr4	24637631	C-T	Homo
SBS	Chr4	32598253	T-A	HET
SBS	Chr4	7190126	G-A	HET
SBS	Chr4	7207641	A-C	HET
SBS	Chr5	13541038	G-T	HET
SBS	Chr5	19640709	A-G	Homo
SBS	Chr5	27200736	T-C	Homo
SBS	Chr5	5508727	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os05g09724
SBS	Chr5	6816342	C-A	HET
SBS	Chr6	4161488	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os06g08460
SBS	Chr7	17027609	G-C	HET
SBS	Chr7	20057483	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os07g33570
SBS	Chr7	2285617	C-T	HET
SBS	Chr8	1530475	T-A	HET
SBS	Chr8	17576688	A-G	HET
SBS	Chr8	2817193	G-A	HET
SBS	Chr9	11604367	A-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g19380
SBS	Chr9	15468933	A-G	HET

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	6938868	6938871	3
Deletion	Chr10	7888226	7888227	1
Deletion	Chr6	7955768	7955773	5	LOC_Os06g14260
Deletion	Chr2	9432573	9432575	2
Deletion	Chr10	9632109	9632110	1	LOC_Os10g18910
Deletion	Chr10	10763001	10787000	23999	4
Deletion	Chr7	11005001	11039000	33999	6
Deletion	Chr11	17340079	17340081	2
Deletion	Chr5	19922652	19922654	2
Deletion	Chr6	23904001	23912000	7999	2
Deletion	Chr8	25764360	25764361	1
Deletion	Chr1	30190001	30304000	113999	13
Deletion	Chr6	31176227	31176228	1
Deletion	Chr3	33251199	33251203	4
Deletion	Chr3	33626267	33626268	1
Deletion	Chr4	34675896	34675917	21

No Insertion

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	30194433	30354373	2
Inversion	Chr1	30306218	30354383	2

Translocations: 7

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	987054	Chr2	19285131
Translocation	Chr6	8501836	Chr5	12027472	2
Translocation	Chr7	9618135	Chr1	30306214	LOC_Os07g16420
Translocation	Chr7	10991974	Chr1	30304165	LOC_Os07g18590
Translocation	Chr7	22701195	Chr4	30701826
Translocation	Chr7	22702442	Chr4	30701840
Translocation	Chr4	32592096	Chr3	5568639	2

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