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Mutant Information

Variant Information

Single base substitutions: 28

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	12983829	G-T	Homo
SBS	Chr1	30299983	G-C	HET
SBS	Chr1	39181584	C-A	HET
SBS	Chr1	41392333	C-T	HET
SBS	Chr10	11149458	C-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g21720
SBS	Chr10	16058281	A-G	HET
SBS	Chr10	16662131	C-A	Homo
SBS	Chr11	11452928	C-T	HET
SBS	Chr11	16749525	G-A	HET
SBS	Chr12	20989512	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g34630
SBS	Chr12	4686034	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g08960
SBS	Chr2	10689286	C-T	HET
SBS	Chr2	27709281	C-T	HET
SBS	Chr3	11988939	G-A	HET
SBS	Chr3	18906929	C-T	HET
SBS	Chr3	29289911	T-A	HET
SBS	Chr3	3422548	G-T	HET
SBS	Chr3	914078	G-A	HET
SBS	Chr5	12743168	G-A	HET
SBS	Chr7	21419589	C-T	HET
SBS	Chr7	6875113	A-G	HET
SBS	Chr8	12863629	C-T	Homo
SBS	Chr8	21532154	G-A	HET
SBS	Chr8	24910541	C-T	HET
SBS	Chr8	8347781	G-A	HET
SBS	Chr8	9799322	G-T	HET
SBS	Chr9	12168681	G-A	Homo
SBS	Chr9	22395327	T-A	HET

Deletions: 9

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	446581	446583	2
Deletion	Chr6	4878659	4878667	8
Deletion	Chr10	6479811	6479812	1
Deletion	Chr10	9660742	9660746	4
Deletion	Chr5	10211889	10211895	6
Deletion	Chr4	10738474	10738475	1
Deletion	Chr8	11365552	11365577	25
Deletion	Chr4	12527674	12527675	1
Deletion	Chr11	12930001	13376000	445999	68

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr2	12409836	12409844	9
Insertion	Chr2	4396816	4396817	2
Insertion	Chr4	10299853	10299854	2
Insertion	Chr4	15715312	15715312	1
Insertion	Chr7	24530941	24530941	1
Insertion	Chr8	20589754	20589757	4

No Inversion

Translocations: 13

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	9558641	Chr4	13186223
Translocation	Chr4	10857537	Chr1	19608415
Translocation	Chr8	15873521	Chr3	15486031	LOC_Os08g26100
Translocation	Chr9	17686904	Chr8	15385358
Translocation	Chr9	17688651	Chr8	15385358
Translocation	Chr12	18587576	Chr5	2015583	LOC_Os12g30950
Translocation	Chr11	18671328	Chr7	7596155	LOC_Os11g31810
Translocation	Chr8	19804596	Chr7	1870478	LOC_Os08g31940
Translocation	Chr12	21634394	Chr3	35243180	2
Translocation	Chr11	22193579	Chr4	5327080
Translocation	Chr11	27806918	Chr6	9599987	LOC_Os11g45960
Translocation	Chr11	27992065	Chr3	27458364	2
Translocation	Chr11	27992119	Chr10	12685621	LOC_Os11g46230

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