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Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	15386352	G-A	HET
SBS	Chr1	15605421	C-G	HET
SBS	Chr10	14249149	G-C	HET
SBS	Chr10	22298562	C-A	Homo
SBS	Chr10	22974155	C-T	HET
SBS	Chr10	3176816	C-T	HET
SBS	Chr10	401890	T-C	HET
SBS	Chr10	4467843	C-A	HET
SBS	Chr11	16018122	A-G	Homo
SBS	Chr11	18069673	C-T	Homo
SBS	Chr11	20933742	G-A	HET
SBS	Chr12	25688304	C-T	HET
SBS	Chr12	9831411	T-A	HET
SBS	Chr2	14720712	G-A	Homo
SBS	Chr2	5746728	C-T	Homo
SBS	Chr3	20697221	A-T	Homo
SBS	Chr3	22081943	T-C	HET
SBS	Chr3	4473930	A-T	HET
SBS	Chr4	13696780	C-T	Homo
SBS	Chr4	18237060	C-A	Homo
SBS	Chr4	5409225	C-T	HET
SBS	Chr5	28717946	T-C	HET
SBS	Chr6	8212931	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g14590
SBS	Chr7	10556685	T-A	HET
SBS	Chr7	12322155	G-A	HET
SBS	Chr7	12632332	G-A	HET
SBS	Chr7	2224822	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g05040
SBS	Chr7	674695	C-T	HET
SBS	Chr8	2087144	C-T	HET
SBS	Chr8	21192559	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os08g33850
SBS	Chr8	7179884	G-C	Homo
SBS	Chr9	1718590	G-A	Homo
SBS	Chr9	18258533	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g30010

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	2952607	2952608	1	LOC_Os02g05940
Deletion	Chr8	5910928	5910938	10	LOC_Os08g10190
Deletion	Chr8	7683212	7683213	1	LOC_Os08g12920
Deletion	Chr8	10480847	10480849	2
Deletion	Chr3	13362876	13362877	1	LOC_Os03g23110
Deletion	Chr8	15543982	15543983	1
Deletion	Chr9	18370001	18412000	41999	6
Deletion	Chr2	19417001	19601000	183999	27
Deletion	Chr2	19617001	19835000	217999	39
Deletion	Chr2	21006001	21029000	22999	3
Deletion	Chr7	24453980	24453981	1
Deletion	Chr8	25193353	25193354	1	LOC_Os08g39800

Insertions: 9

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	4555088	4555088	1
Insertion	Chr10	15983382	15983459	78
Insertion	Chr12	24057503	24057504	2
Insertion	Chr2	33528747	33528747	1
Insertion	Chr2	8678110	8678110	1
Insertion	Chr4	12508144	12508216	73
Insertion	Chr4	3853765	3853767	3	LOC_Os04g07260
Insertion	Chr4	4697248	4697271	24
Insertion	Chr9	219265	219265	1

Inversions: 7

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	1817028	2261479
Inversion	Chr12	1817038	2261484
Inversion	Chr10	8551188	8924318	2
Inversion	Chr10	8551260	8924335	2
Inversion	Chr9	18414947	18752492	2
Inversion	Chr2	18944435	19896629	2
Inversion	Chr11	27705540	27795813	2

Translocations: 11

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr4	2731021	Chr2	6409685	2
Translocation	Chr5	5212063	Chr1	19483686	2
Translocation	Chr11	5309909	Chr5	12212724	2
Translocation	Chr4	5328448	Chr1	33752556	LOC_Os04g09910
Translocation	Chr10	5457160	Chr2	14657860
Translocation	Chr12	7765420	Chr1	1946542
Translocation	Chr10	9076072	Chr4	2768659
Translocation	Chr9	18373701	Chr3	15200048
Translocation	Chr12	23986652	Chr7	19565673
Translocation	Chr3	25354383	Chr1	32550341
Translocation	Chr11	28408556	Chr9	408474	2

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