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Mutant Information

Variant Information

Single base substitutions: 21

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	22600081	T-A	HET
SBS	Chr1	40407723	C-T	HET
SBS	Chr1	41673418	G-A	HET
SBS	Chr10	16343022	T-C	Homo
SBS	Chr10	6508698	G-A	HET
SBS	Chr12	15577773	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g26600
SBS	Chr12	15613360	A-G	HET
SBS	Chr2	26255874	A-G	HET
SBS	Chr2	31775798	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g51880
SBS	Chr2	34745276	G-A	Homo
SBS	Chr3	9929280	T-G	HET
SBS	Chr4	23714267	A-G	Homo
SBS	Chr4	23789074	A-T	Homo
SBS	Chr5	11211953	A-C	Homo
SBS	Chr5	2709310	C-T	HET
SBS	Chr6	29057990	C-T	Homo
SBS	Chr6	9896600	T-A	Homo
SBS	Chr7	7844806	C-T	HET
SBS	Chr8	23926849	T-C	HET
SBS	Chr8	24272759	T-A	HET
SBS	Chr8	25629568	C-G	HET

Deletions: 11

Variant Type	Chromosome	Start	End	Size (bp)
Deletion	Chr9	3029982	3029984	2
Deletion	Chr4	5671722	5671723	1
Deletion	Chr6	9068726	9068727	1
Deletion	Chr7	12260562	12260563	1
Deletion	Chr10	19366404	19366414	10
Deletion	Chr7	26379822	26379823	1
Deletion	Chr4	28113882	28113890	8
Deletion	Chr4	30243468	30243485	17
Deletion	Chr1	30711366	30711383	17
Deletion	Chr1	35184739	35184748	9
Deletion	Chr1	35395850	35395852	2

Insertions: 9

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr10	7168523	7168523	1
Insertion	Chr11	20317393	20317395	3	LOC_Os11g34680
Insertion	Chr12	21964312	21964312	1
Insertion	Chr12	770015	770016	2
Insertion	Chr4	1274218	1274220	3
Insertion	Chr5	9941976	9941976	1
Insertion	Chr6	19514646	19514647	2
Insertion	Chr7	27316836	27316836	1
Insertion	Chr8	7315208	7315208	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	7501809	7811634
Inversion	Chr5	7501823	7811667
Inversion	Chr4	22962577	23390545	LOC_Os04g38650
Inversion	Chr4	22962591	23390554	LOC_Os04g38650

Translocations: 12

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	2171235	Chr6	5070891
Translocation	Chr4	2967476	Chr1	23436167	LOC_Os04g05780
Translocation	Chr9	5166388	Chr1	17288896
Translocation	Chr6	5537860	Chr4	8208164
Translocation	Chr8	10395237	Chr1	31269133
Translocation	Chr10	11709917	Chr2	18066714	LOC_Os10g22570
Translocation	Chr8	14932717	Chr5	20403560	2
Translocation	Chr3	16448154	Chr1	25435244
Translocation	Chr7	19416066	Chr3	1604015
Translocation	Chr12	21609253	Chr3	17354358	LOC_Os12g35540
Translocation	Chr8	22301552	Chr6	13619044	2
Translocation	Chr12	22623110	Chr11	22169070	2

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