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Mutant Information

Variant Information

Single base substitutions: 47

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	9893006	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g17214
SBS	Chr1	18084250	T-A	Homo
SBS	Chr1	20610807	T-C	Homo
SBS	Chr1	24144484	A-G	Homo
SBS	Chr1	25174919	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g43930
SBS	Chr2	4898021	C-T	Homo
SBS	Chr2	15077683	C-T	Homo
SBS	Chr2	28592755	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g46870
SBS	Chr2	33882166	C-T	HET
SBS	Chr2	34464326	C-T	HET
SBS	Chr3	3858284	G-C	HET
SBS	Chr3	7902467	C-A	HET
SBS	Chr3	9355076	A-T	Homo
SBS	Chr3	28216393	C-T	Homo
SBS	Chr4	2163939	G-T	Homo
SBS	Chr4	2211002	G-A	Homo
SBS	Chr4	9343696	T-C	HET
SBS	Chr4	16412181	C-T	Homo
SBS	Chr4	31183077	C-T	Homo
SBS	Chr5	11635879	G-A	HET
SBS	Chr5	20350567	C-A	HET
SBS	Chr6	8750805	A-G	HET
SBS	Chr6	14496321	G-A	HET
SBS	Chr6	24794704	T-C	HET
SBS	Chr6	26928171	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os06g44600
SBS	Chr7	2413055	T-A	HET
SBS	Chr7	5904086	G-A	HET
SBS	Chr7	9721491	C-A	HET
SBS	Chr7	9721492	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os07g16580
SBS	Chr7	15041837	C-T	HET
SBS	Chr8	1883829	G-A	HET
SBS	Chr9	10913480	T-C	Homo
SBS	Chr9	14760130	C-T	HET
SBS	Chr10	1996590	T-C	HET
SBS	Chr10	9532637	A-T	HET
SBS	Chr10	10360665	A-G	HET
SBS	Chr10	15567728	T-G	Homo
SBS	Chr10	15574092	C-A	Homo
SBS	Chr10	15574093	G-A	Homo
SBS	Chr10	15964442	G-A	HET	STOP_GAINED	LOC_Os10g30660
SBS	Chr11	8142180	T-C	HET
SBS	Chr11	9350952	T-G	Homo
SBS	Chr11	10109410	A-G	Homo
SBS	Chr11	11896344	G-A	HET
SBS	Chr11	21074471	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g35880
SBS	Chr12	13876948	G-C	HET
SBS	Chr12	22554218	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g36780

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)
Deletion	Chr7	1550728	1550730	2
Deletion	Chr11	2054200	2054204	4
Deletion	Chr2	2058831	2058854	23
Deletion	Chr5	4605333	4605343	10
Deletion	Chr8	5558614	5558620	6
Deletion	Chr11	7657616	7657619	3
Deletion	Chr11	9285691	9285708	17
Deletion	Chr10	15567704	15567705	1
Deletion	Chr3	16375335	16375344	9
Deletion	Chr5	19130112	19130115	3
Deletion	Chr8	19897823	19897830	7
Deletion	Chr1	21986153	21986154	1
Deletion	Chr8	22872749	22872750	1
Deletion	Chr1	25580406	25580408	2

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr6	8325955	8325957	3
Insertion	Chr8	110222	110227	6	LOC_Os08g01170
Insertion	Chr4	4552223	4552223	1
Insertion	Chr7	12594231	12594231	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	24808477	25434223
Inversion	Chr1	24808500	25011909	2
Inversion	Chr2	28758826	28856243	LOC_Os02g47110
Inversion	Chr2	28758833	28856250	LOC_Os02g47110

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	1478248	Chr3	5888655
Translocation	Chr11	19931472	Chr4	16892855
Translocation	Chr4	27579883	Chr1	36209598	2
Translocation	Chr11	27879282	Chr6	9219394

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