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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr10	11833038	C-G	HET
SBS	Chr10	3133576	G-A	HET
SBS	Chr10	9318844	T-A	HET
SBS	Chr11	1062294	A-C	HET
SBS	Chr11	15807926	T-G	HET
SBS	Chr11	18727637	C-T	Homo
SBS	Chr12	14149285	G-C	HET
SBS	Chr12	17947102	A-G	HET
SBS	Chr2	34342986	C-T	Homo
SBS	Chr2	9351480	C-G	HET
SBS	Chr3	12805972	G-A	HET
SBS	Chr3	14047935	G-A	HET
SBS	Chr3	20575579	T-C	HET
SBS	Chr3	25377548	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g44950
SBS	Chr4	2361885	C-A	HET
SBS	Chr4	25559301	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g43180
SBS	Chr4	7279312	G-A	Homo
SBS	Chr5	8795952	G-C	HET
SBS	Chr6	6088883	A-T	Homo
SBS	Chr8	23310853	T-A	HET
SBS	Chr8	27490137	C-A	HET
SBS	Chr8	4636190	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os08g08140
SBS	Chr8	5298573	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os08g09140
SBS	Chr8	9730453	C-T	HET
SBS	Chr9	3297127	C-T	HET

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	81774	81777	3	LOC_Os09g01050
Deletion	Chr1	495639	495652	13
Deletion	Chr5	725152	725153	1
Deletion	Chr7	3197553	3197566	13
Deletion	Chr8	3857001	3934000	76999	8
Deletion	Chr5	4499793	4499803	10
Deletion	Chr8	4722001	4920000	197999	23
Deletion	Chr8	4927001	5176000	248999	37
Deletion	Chr3	7089553	7089572	19
Deletion	Chr8	8842771	8842772	1
Deletion	Chr9	11915041	11915047	6
Deletion	Chr12	14234917	14234930	13
Deletion	Chr12	19129698	19129699	1
Deletion	Chr5	21654725	21654733	8
Deletion	Chr1	42364557	42364558	1

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr11	16671982	16672012	31
Insertion	Chr2	22572255	22572256	2
Insertion	Chr6	22348467	22348467	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	4248276	4731191	LOC_Os08g07560
Inversion	Chr10	4911594	4922359	LOC_Os10g09080
Inversion	Chr10	4911599	4922358	LOC_Os10g09080
Inversion	Chr3	5288937	5316698	LOC_Os03g10370
Inversion	Chr3	5290417	5321538	2

Translocations: 8

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	4386582	Chr3	6893730
Translocation	Chr6	4391633	Chr3	6893714	LOC_Os06g08770
Translocation	Chr8	5022144	Chr6	9639774	2
Translocation	Chr11	7158251	Chr8	20379610
Translocation	Chr10	18197349	Chr4	15932902	2
Translocation	Chr5	24264893	Chr3	5290392	2
Translocation	Chr5	24265020	Chr3	5288940	2
Translocation	Chr11	24440485	Chr5	21302185

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