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Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	19344968	G-A	Homo
SBS	Chr1	29098496	T-A	Homo
SBS	Chr1	37920336	T-A	HET
SBS	Chr10	19265356	A-G	Homo
SBS	Chr10	7335586	G-C	HET
SBS	Chr11	21151301	A-C	Homo
SBS	Chr11	25901391	T-C	HET
SBS	Chr11	28470274	C-A	HET
SBS	Chr11	5324788	A-G	HET
SBS	Chr11	9390973	C-T	HET
SBS	Chr12	13920746	C-G	HET
SBS	Chr12	18159265	T-C	HET
SBS	Chr2	12566714	T-G	HET
SBS	Chr2	129049	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g01230
SBS	Chr2	21608091	T-C	HET
SBS	Chr2	2554045	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g05320
SBS	Chr2	2554065	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os02g05320
SBS	Chr2	27526249	C-T	HET
SBS	Chr2	34508034	G-C	HET
SBS	Chr3	20549579	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os03g37060
SBS	Chr3	22766710	C-G	HET
SBS	Chr3	24171839	G-A	HET
SBS	Chr4	1606769	T-C	HET
SBS	Chr4	6558420	C-T	HET
SBS	Chr5	23267205	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os05g39620
SBS	Chr5	631871	G-A	Homo
SBS	Chr6	11241736	C-T	Homo
SBS	Chr6	17401785	G-A	HET
SBS	Chr6	26882178	G-A	HET
SBS	Chr7	20057184	C-T	HET
SBS	Chr8	13102076	A-T	HET
SBS	Chr9	18554046	C-T	HET
SBS	Chr9	18659988	G-T	HET

Deletions: 8

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	1506225	1506226	1
Deletion	Chr10	9252523	9252534	11
Deletion	Chr12	11911824	11911825	1
Deletion	Chr2	14870579	14870581	2
Deletion	Chr6	15789001	15821000	31999	3
Deletion	Chr7	19879001	19891000	11999	LOC_Os07g33270
Deletion	Chr6	23110430	23110436	6
Deletion	Chr1	27311640	27311642	2

Insertions: 8

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr2	14908542	14908585	44
Insertion	Chr4	7452431	7452431	1
Insertion	Chr5	17611700	17611700	1	LOC_Os05g30380
Insertion	Chr5	7260800	7260801	2
Insertion	Chr6	16046926	16046935	10
Insertion	Chr8	18431140	18431140	1
Insertion	Chr8	2824391	2824391	1	LOC_Os08g05360
Insertion	Chr9	4160493	4160518	26

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	2010368	2084856	LOC_Os05g04380
Inversion	Chr5	2010374	2084861	LOC_Os05g04380
Inversion	Chr9	7010452	7086374
Inversion	Chr9	7010470	7086388

Translocations: 13

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	4699954	Chr7	27254265
Translocation	Chr9	5651879	Chr6	16283968
Translocation	Chr11	6769544	Chr5	8802760	2
Translocation	Chr4	7810839	Chr1	2951003	2
Translocation	Chr7	8964219	Chr2	24244989
Translocation	Chr6	9794993	Chr4	17545681	2
Translocation	Chr3	10357770	Chr2	34582599	LOC_Os03g18454
Translocation	Chr10	13367222	Chr1	25286864
Translocation	Chr7	14356428	Chr6	14832845	2
Translocation	Chr10	21733827	Chr2	18290441	2
Translocation	Chr11	22808999	Chr8	24300511
Translocation	Chr11	26331230	Chr10	20813218	2
Translocation	Chr11	27626390	Chr6	9802013

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