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Mutant Information

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1533403	C-A	HET
SBS	Chr1	17706203	A-G	HET
SBS	Chr1	27810451	C-T	Homo
SBS	Chr1	31466285	C-T	HET
SBS	Chr1	9335223	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os01g16440
SBS	Chr10	22254145	T-C	HET
SBS	Chr10	608313	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os10g01970
SBS	Chr10	7787636	A-T	HET
SBS	Chr11	20231675	G-A	HET
SBS	Chr11	27805572	G-A	HET
SBS	Chr11	5693263	G-T	HET
SBS	Chr12	11519557	A-C	Homo
SBS	Chr12	22055327	C-G	HET
SBS	Chr2	28442198	T-A	HET
SBS	Chr3	17389084	C-A	Homo
SBS	Chr4	13843504	A-T	HET
SBS	Chr4	25744086	A-T	HET
SBS	Chr4	30920163	G-T	HET
SBS	Chr5	17737649	C-T	HET
SBS	Chr6	15288932	C-T	HET
SBS	Chr6	22054125	G-A	HET
SBS	Chr6	25480592	C-T	HET
SBS	Chr7	23921957	G-A	HET
SBS	Chr7	24983272	G-A	HET
SBS	Chr7	4257990	A-G	HET
SBS	Chr7	8338341	C-T	HET
SBS	Chr8	13882024	C-T	Homo
SBS	Chr9	21438288	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os09g37170
SBS	Chr9	2653363	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g04940

Deletions: 11

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	3415769	3415774	5
Deletion	Chr6	6671542	6671543	1
Deletion	Chr5	9090122	9090126	4
Deletion	Chr11	9938119	9938120	1
Deletion	Chr12	10660448	10660450	2
Deletion	Chr7	14820001	14850000	29999	6
Deletion	Chr10	15934133	15934179	46
Deletion	Chr5	16941093	16941103	10	LOC_Os05g28900
Deletion	Chr12	17891911	17891917	6
Deletion	Chr7	26494000	26494001	1	LOC_Os07g44340
Deletion	Chr3	35507980	35507982	2

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	23047852	23047853	2
Insertion	Chr1	31479258	31479259	2
Insertion	Chr11	16232041	16232041	1	LOC_Os11g28230
Insertion	Chr9	8299252	8299252	1

Inversions: 8

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr7	3446552	3446696	LOC_Os07g06990
Inversion	Chr2	8107940	9022720	2
Inversion	Chr2	8108096	9022719	2
Inversion	Chr6	10603703	10699346
Inversion	Chr6	10603710	10699350
Inversion	Chr8	13369997	13388041
Inversion	Chr4	14113907	14477712
Inversion	Chr4	14113923	14477721

Translocations: 10

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	1589518	Chr2	9833429
Translocation	Chr5	5504348	Chr2	17672614	2
Translocation	Chr9	6773221	Chr8	14543851	2
Translocation	Chr9	7281587	Chr5	26690877	2
Translocation	Chr9	7281592	Chr5	26691811	2
Translocation	Chr10	10189304	Chr4	14595105
Translocation	Chr11	13147373	Chr5	14831586	LOC_Os11g22850
Translocation	Chr11	15746022	Chr1	2790247	2
Translocation	Chr5	20414749	Chr1	43066778	2
Translocation	Chr12	20844727	Chr3	1440032

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