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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10662578	G-A	HET
SBS	Chr1	21376556	A-G	HET
SBS	Chr1	24486739	C-T	HET
SBS	Chr1	36742442	A-G	HET
SBS	Chr10	1845890	C-T	HET
SBS	Chr10	6071396	C-A	HET
SBS	Chr11	11942884	G-A	Homo
SBS	Chr11	15383128	G-T	HET
SBS	Chr11	724468	A-T	Homo
SBS	Chr12	1418442	G-A	Homo
SBS	Chr12	2526841	C-A	Homo
SBS	Chr12	7552677	C-T	HET
SBS	Chr2	12073581	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g20470
SBS	Chr2	23647112	C-T	Homo
SBS	Chr2	7878510	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g14360
SBS	Chr3	13133280	G-T	HET
SBS	Chr3	18930857	C-A	HET
SBS	Chr3	20351717	C-T	HET
SBS	Chr3	23045251	G-A	HET
SBS	Chr4	13515874	T-A	Homo
SBS	Chr4	31831061	T-A	HET
SBS	Chr7	24641655	A-T	Homo
SBS	Chr7	9424123	C-T	HET
SBS	Chr9	1194260	C-G	HET
SBS	Chr9	8437185	G-A	Homo

Deletions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	1370232	1370243	11	LOC_Os03g03220
Deletion	Chr9	4859938	4859950	12	LOC_Os09g09090
Deletion	Chr5	5916091	5916092	1
Deletion	Chr7	6389816	6389817	1
Deletion	Chr7	8388856	8388858	2
Deletion	Chr7	9380475	9380476	1
Deletion	Chr4	11478854	11478855	1
Deletion	Chr9	15506057	15506069	12	LOC_Os09g25860
Deletion	Chr4	16168001	16211000	42999	6
Deletion	Chr2	18478191	18478211	20
Deletion	Chr12	25899039	25899042	3
Deletion	Chr5	27954344	27954767	423
Deletion	Chr5	28754077	28754078	1

Insertions: 9

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	21801636	21801636	1
Insertion	Chr1	28536114	28536119	6
Insertion	Chr10	12010409	12010410	2
Insertion	Chr11	1476412	1476413	2
Insertion	Chr12	13921592	13921594	3
Insertion	Chr3	14316094	14316095	2
Insertion	Chr4	21536977	21536982	6
Insertion	Chr6	16047166	16047234	69
Insertion	Chr7	9846175	9846175	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	6367543	6940427	LOC_Os08g10810
Inversion	Chr4	16821830	16822060

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	7290184	Chr4	4507591
Translocation	Chr2	11547140	Chr1	38746611	LOC_Os02g19730
Translocation	Chr8	16049363	Chr4	13175658	LOC_Os08g26310
Translocation	Chr11	18033977	Chr1	31269142
Translocation	Chr2	19802229	Chr1	33760538
Translocation	Chr9	21954633	Chr6	6426492	LOC_Os09g38104

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