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Mutant Information

Variant Information

Single base substitutions: 35

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	21129113	A-G	HET
SBS	Chr10	5330067	T-A	HET
SBS	Chr11	23610596	G-A	HET
SBS	Chr11	25342379	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os11g42090
SBS	Chr11	25342380	C-A	HET
SBS	Chr11	9891787	C-A	Homo
SBS	Chr12	21523172	G-A	HET
SBS	Chr12	3923537	C-T	Homo
SBS	Chr12	4451975	C-G	Homo
SBS	Chr2	15879566	G-A	HET
SBS	Chr2	20572303	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g34380
SBS	Chr2	29136139	T-C	Homo
SBS	Chr3	11867678	C-T	Homo
SBS	Chr3	15197137	T-G	Homo
SBS	Chr3	19999903	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os03g36050
SBS	Chr3	30222615	G-C	HET
SBS	Chr4	16259562	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g27500
SBS	Chr5	12698830	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os05g22390
SBS	Chr5	13850131	T-A	HET
SBS	Chr5	25737320	C-T	Homo
SBS	Chr5	8667222	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g15280
SBS	Chr6	1926517	T-A	Homo
SBS	Chr6	21428998	C-G	HET
SBS	Chr6	26320985	C-T	HET
SBS	Chr6	526240	A-G	Homo
SBS	Chr7	15904437	G-A	HET
SBS	Chr7	28490090	A-T	Homo
SBS	Chr7	4911038	T-G	HET
SBS	Chr7	4911039	G-T	HET
SBS	Chr7	7359700	T-C	HET
SBS	Chr8	11433587	A-C	Homo
SBS	Chr8	2166261	C-T	HET
SBS	Chr8	2664995	G-A	HET
SBS	Chr8	3271682	T-A	HET
SBS	Chr9	3356259	C-T	Homo

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	496658	496664	6
Deletion	Chr8	1286231	1286238	7
Deletion	Chr11	3946483	3946486	3	LOC_Os11g07730
Deletion	Chr4	5834001	5883000	48999	9
Deletion	Chr6	6074566	6074567	1
Deletion	Chr1	10222226	10222241	15
Deletion	Chr8	11329001	11390000	60999	10
Deletion	Chr3	16110380	16110381	1
Deletion	Chr6	16784001	16814000	29999	5
Deletion	Chr3	26947945	26947948	3
Deletion	Chr3	30817001	30914000	96999	14
Deletion	Chr3	32008063	32008082	19
Deletion	Chr2	32216566	32216571	5
Deletion	Chr2	34404299	34404308	9

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	12472073	12472073	1
Insertion	Chr2	32780259	32780260	2
Insertion	Chr2	33528747	33528747	1
Insertion	Chr4	18974417	18974468	52

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	3806725	3919139	2

Translocations: 8

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	3919145	Chr4	17160515	LOC_Os10g07410
Translocation	Chr10	3924210	Chr4	17160528
Translocation	Chr10	3993118	Chr4	26337615	2
Translocation	Chr11	15982162	Chr8	7146094	2
Translocation	Chr4	19807946	Chr2	15753576
Translocation	Chr11	22938224	Chr10	3992277	2
Translocation	Chr6	23398482	Chr3	22535157
Translocation	Chr7	26876181	Chr4	30318988	2

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