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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	508822	G-A	HET
SBS	Chr1	22581211	C-T	Homo
SBS	Chr2	90799	C-T	Homo
SBS	Chr2	4495151	C-T	HET
SBS	Chr2	8122704	C-T	HET
SBS	Chr2	33724536	G-A	HET
SBS	Chr3	8772776	G-C	Homo
SBS	Chr3	23922966	T-A	HET
SBS	Chr3	24998468	G-T	HET
SBS	Chr3	30168119	G-A	HET
SBS	Chr4	6501451	A-C	Homo
SBS	Chr5	10104235	C-G	Homo
SBS	Chr5	11505565	C-T	Homo
SBS	Chr5	12804601	T-C	Homo
SBS	Chr5	18058039	T-C	Homo
SBS	Chr5	28734969	G-A	HET
SBS	Chr5	29859800	C-T	HET
SBS	Chr6	1763264	C-G	HET
SBS	Chr6	15823295	C-T	HET
SBS	Chr6	26227408	G-A	HET
SBS	Chr6	27180963	C-T	HET
SBS	Chr7	6741513	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g12070
SBS	Chr8	13038161	T-C	HET
SBS	Chr8	13038162	C-T	HET
SBS	Chr8	27503368	C-T	Homo
SBS	Chr9	20566922	C-T	HET
SBS	Chr10	129435	G-A	HET

Deletions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	515518	515519	1
Deletion	Chr11	2149530	2149536	6
Deletion	Chr8	2234614	2234625	11
Deletion	Chr6	5989001	6100000	110999	12
Deletion	Chr2	9444959	9444962	3
Deletion	Chr3	12851137	12851139	2
Deletion	Chr1	18081474	18081479	5
Deletion	Chr11	18753302	18753304	2
Deletion	Chr1	20699802	20699809	7
Deletion	Chr1	22214194	22214198	4
Deletion	Chr5	23837849	23837850	1
Deletion	Chr8	24958210	24958211	1
Deletion	Chr3	26994974	26994982	8
Deletion	Chr2	29002229	29002233	4
Deletion	Chr4	29204001	29261000	56999	11
Deletion	Chr4	29264001	29353000	88999	12
Deletion	Chr3	36182600	36182603	3	LOC_Os03g64020

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	23401207	23401210	4
Insertion	Chr1	19663187	19663187	1
Insertion	Chr6	4802	4802	1
Insertion	Chr8	6625934	6625934	1
Insertion	Chr11	14447578	14447578	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	7333890	7548903	2
Inversion	Chr12	7333937	7548914	2

Translocations: 8

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	1993017	Chr11	2062705	2
Translocation	Chr9	4757291	Chr5	5134646	2
Translocation	Chr8	5014731	Chr4	6925976	2
Translocation	Chr6	5978743	Chr4	3687765	LOC_Os06g11370
Translocation	Chr11	7332194	Chr10	1903312	LOC_Os11g13390
Translocation	Chr10	8060903	Chr5	16540625	2
Translocation	Chr4	15518945	Chr2	22225358
Translocation	Chr3	25610944	Chr2	19691663

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