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Mutant Information

Variant Information

Single base substitutions: 34

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	12512727	C-T	Homo
SBS	Chr1	24958491	G-C	Homo
SBS	Chr1	7946871	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os01g14180
SBS	Chr10	113201	T-A	HET
SBS	Chr10	1802367	A-G	HET
SBS	Chr11	14648047	G-A	HET
SBS	Chr11	21439892	G-A	HET
SBS	Chr12	26070815	A-T	Homo
SBS	Chr2	12423352	G-A	HET
SBS	Chr2	6665147	G-A	Homo
SBS	Chr3	15822283	C-T	Homo
SBS	Chr3	21139988	G-A	HET
SBS	Chr3	22723606	G-A	HET
SBS	Chr3	26339321	T-G	Homo
SBS	Chr3	9380487	C-G	Homo
SBS	Chr4	11269014	G-T	HET
SBS	Chr4	25145495	A-G	Homo
SBS	Chr5	12381919	C-T	HET
SBS	Chr5	13366940	C-T	HET
SBS	Chr5	15602732	G-T	HET
SBS	Chr5	15602733	T-G	HET
SBS	Chr5	15602735	G-T	Homo
SBS	Chr5	17481253	G-C	Homo
SBS	Chr5	18812554	G-T	Homo
SBS	Chr5	20684809	A-T	HET
SBS	Chr5	274071	C-T	HET
SBS	Chr7	10727347	G-A	Homo
SBS	Chr7	29536557	T-C	Homo
SBS	Chr8	1185660	C-A	Homo
SBS	Chr8	15798683	C-T	HET
SBS	Chr8	21510951	G-A	HET
SBS	Chr8	21787370	G-A	HET
SBS	Chr8	798139	G-A	HET
SBS	Chr9	15598906	A-C	HET

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	3478370	3478371	1
Deletion	Chr9	6400677	6400679	2
Deletion	Chr8	10480847	10480849	2
Deletion	Chr1	13863735	13863746	11
Deletion	Chr10	14213580	14213581	1
Deletion	Chr9	18372760	18372763	3
Deletion	Chr4	19860229	19860230	1
Deletion	Chr6	20369067	20369084	17
Deletion	Chr12	20377537	20377539	2
Deletion	Chr11	22375805	22375808	3
Deletion	Chr7	22921577	22921579	2	LOC_Os07g38220
Deletion	Chr5	24996736	24996744	8
Deletion	Chr1	25825893	25825901	8	LOC_Os01g45510
Deletion	Chr11	26668397	26668402	5
Deletion	Chr1	41095839	41095841	2
Deletion	Chr1	42257182	42257190	8	LOC_Os01g72850

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	12931417	12931420	4
Insertion	Chr10	10502864	10502864	1
Insertion	Chr3	13666993	13666994	2
Insertion	Chr6	13982283	13982283	1
Insertion	Chr6	1886472	1886472	1
Insertion	Chr8	11235992	11235992	1

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	16850079	16867023
Inversion	Chr10	20009499	20039216
Inversion	Chr12	20351667	20352031
Inversion	Chr3	21771964	21924383	2
Inversion	Chr3	21771971	21924384	2
Inversion	Chr11	28246283	28434566	2

Translocations: 12

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	1847716	Chr5	23294899	2
Translocation	Chr12	1852479	Chr3	11347841
Translocation	Chr12	4126723	Chr10	10547348
Translocation	Chr5	4954645	Chr4	857648
Translocation	Chr6	8568101	Chr5	27654975
Translocation	Chr10	10976914	Chr7	10615917
Translocation	Chr11	11776707	Chr5	29659785	2
Translocation	Chr11	11776720	Chr5	29659583	2
Translocation	Chr10	13651396	Chr2	10940031	2
Translocation	Chr8	15958057	Chr2	610772
Translocation	Chr11	21376693	Chr5	24751170	2
Translocation	Chr11	27756841	Chr4	3131195

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