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Mutant Information

Variant Information

Single base substitutions: 46

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10918931	C-T	HET
SBS	Chr1	18830648	G-A	HET
SBS	Chr1	29806978	G-A	HET
SBS	Chr1	5431653	A-T	Homo
SBS	Chr10	15300557	A-T	HET
SBS	Chr10	888731	C-T	HET
SBS	Chr11	10751805	T-C	Homo
SBS	Chr11	11323253	G-A	HET
SBS	Chr11	11361137	T-C	Homo
SBS	Chr11	8994086	C-T	HET
SBS	Chr12	1798446	G-A	Homo
SBS	Chr12	18725702	C-G	Homo
SBS	Chr12	20117448	C-T	Homo
SBS	Chr12	20298999	A-G	Homo
SBS	Chr12	21803249	A-G	HET
SBS	Chr12	3114478	C-T	Homo
SBS	Chr12	5210515	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os12g09840
SBS	Chr12	9030948	A-C	Homo
SBS	Chr12	9063559	C-A	Homo
SBS	Chr2	10089453	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os02g17534
SBS	Chr2	19368258	G-A	HET
SBS	Chr2	335366	T-C	HET
SBS	Chr3	17229388	T-A	HET
SBS	Chr3	17229393	C-A	HET
SBS	Chr3	17273894	T-G	HET
SBS	Chr3	32311827	C-T	Homo
SBS	Chr3	4936057	G-A	HET
SBS	Chr4	10120957	A-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g18330
SBS	Chr4	12999371	G-T	HET
SBS	Chr4	15937683	C-T	HET
SBS	Chr4	21258675	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g34976
SBS	Chr4	24841602	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g41920
SBS	Chr4	26293214	C-T	Homo
SBS	Chr4	8396797	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g14930
SBS	Chr5	10750325	C-A	HET
SBS	Chr5	1623745	G-A	HET
SBS	Chr5	1944073	G-C	HET
SBS	Chr5	24010664	C-T	Homo
SBS	Chr5	26049157	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os05g44792
SBS	Chr6	10687965	T-C	Homo
SBS	Chr6	27913900	C-T	HET
SBS	Chr8	18783419	A-T	HET
SBS	Chr9	13527509	G-T	Homo
SBS	Chr9	4886230	A-G	Homo
SBS	Chr9	639284	C-A	HET
SBS	Chr9	6607532	C-T	HET

Deletions: 11

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	1873135	1873137	2
Deletion	Chr2	2706071	2706072	1	LOC_Os02g05570
Deletion	Chr9	10162636	10162637	1
Deletion	Chr1	12129001	12162000	32999	3
Deletion	Chr7	12166680	12166681	1
Deletion	Chr1	12168001	12188000	19999	4
Deletion	Chr12	14137706	14137707	1
Deletion	Chr8	15224635	15224638	3
Deletion	Chr5	17307145	17307149	4
Deletion	Chr1	21303391	21303394	3
Deletion	Chr2	27701122	27701124	2	LOC_Os02g45520

Insertions: 10

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	22622503	22622504	2
Insertion	Chr12	11039712	11039714	3
Insertion	Chr12	16831683	16831683	1
Insertion	Chr2	12409833	12409844	12
Insertion	Chr4	21106420	21106421	2
Insertion	Chr4	7914316	7914319	4
Insertion	Chr5	29923277	29923278	2
Insertion	Chr7	239656	239657	2
Insertion	Chr8	25744699	25744700	2
Insertion	Chr9	5748486	5748486	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	5934241	6421517
Inversion	Chr6	7537988	7617590	2
Inversion	Chr6	7538396	7617594	2
Inversion	Chr10	22138466	22138585	LOC_Os10g41220

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	3524355	Chr2	30308071	LOC_Os07g07130
Translocation	Chr7	3524356	Chr2	18273533	LOC_Os07g07130
Translocation	Chr7	3524370	Chr2	30308540	LOC_Os07g07130
Translocation	Chr11	5818862	Chr2	25950131	2
Translocation	Chr9	10540260	Chr5	29777448
Translocation	Chr8	11689658	Chr2	13608523

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