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Mutant Information

Variant Information

Single base substitutions: 38

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	8042091	G-A	HET
SBS	Chr10	13819316	C-T	HET
SBS	Chr10	15467692	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os10g29750
SBS	Chr10	1857188	C-T	HET
SBS	Chr11	10160124	C-A	HET
SBS	Chr11	3272749	G-A	HET
SBS	Chr11	9527485	G-A	HET
SBS	Chr12	11231259	A-G	HET
SBS	Chr12	17601624	G-C	Homo
SBS	Chr12	24680699	C-A	HET
SBS	Chr12	5210562	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g09840
SBS	Chr2	1006555	C-T	HET
SBS	Chr2	16652768	A-G	Homo
SBS	Chr2	35369512	C-A	Homo
SBS	Chr3	11385413	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os03g20150
SBS	Chr3	16698643	C-G	HET
SBS	Chr3	17061545	A-G	Homo
SBS	Chr3	28924632	G-A	HET
SBS	Chr3	29799928	T-A	HET
SBS	Chr3	34650117	A-T	Homo
SBS	Chr3	34803592	T-A	HET
SBS	Chr3	4079253	C-T	HET
SBS	Chr4	32577057	C-T	HET
SBS	Chr4	35174680	T-A	Homo
SBS	Chr4	5059067	T-G	HET
SBS	Chr4	6073709	T-C	Homo
SBS	Chr5	17387404	G-A	HET
SBS	Chr5	29572892	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g51560
SBS	Chr5	6380585	A-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g11300
SBS	Chr6	1334943	A-T	HET
SBS	Chr6	27209505	C-T	HET
SBS	Chr7	7730403	A-G	HET
SBS	Chr8	1333761	C-A	HET
SBS	Chr8	22456043	T-A	HET
SBS	Chr8	26727698	T-G	HET
SBS	Chr8	26727704	A-T	HET
SBS	Chr9	19155947	G-A	HET
SBS	Chr9	6352972	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g11400

Deletions: 18

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	112233	112252	19	LOC_Os09g01100
Deletion	Chr12	3597604	3597605	1
Deletion	Chr4	6298847	6298852	5
Deletion	Chr10	6479811	6479812	1
Deletion	Chr4	6610086	6610088	2	LOC_Os04g12040
Deletion	Chr12	7120001	7169000	48999	6
Deletion	Chr5	7522782	7522783	1
Deletion	Chr4	10528213	10528214	1
Deletion	Chr6	16721066	16721067	1
Deletion	Chr6	16803170	16803171	1
Deletion	Chr6	17369328	17369330	2
Deletion	Chr5	17866014	17866016	2
Deletion	Chr3	18615001	18642000	26999	5
Deletion	Chr10	20559227	20559233	6
Deletion	Chr1	21313508	21313510	2
Deletion	Chr3	22964863	22964876	13
Deletion	Chr4	23833269	23833304	35
Deletion	Chr1	30607129	30607130	1

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr3	7325234	7325235	2
Insertion	Chr4	21859745	21859745	1	LOC_Os04g35870
Insertion	Chr7	29484391	29484399	9

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	18642598	19293737	LOC_Os03g32590

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	7078587	Chr5	18623416	LOC_Os11g12600
Translocation	Chr7	11309460	Chr5	23776748
Translocation	Chr12	16335356	Chr7	3932771	2
Translocation	Chr5	18483759	Chr3	6389727
Translocation	Chr11	19842431	Chr1	19348949
Translocation	Chr4	32666776	Chr1	10890443	LOC_Os04g54910

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