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Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11559019	C-G	HET
SBS	Chr1	14635062	C-A	HET
SBS	Chr1	29000475	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os01g50500
SBS	Chr1	29000476	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os01g50500
SBS	Chr1	34398082	A-G	HET
SBS	Chr1	8103542	C-A	HET
SBS	Chr10	12604490	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g24560
SBS	Chr10	2773709	A-G	Homo
SBS	Chr10	4015204	T-G	Homo
SBS	Chr10	6990676	A-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g12560
SBS	Chr11	12640229	A-C	HET
SBS	Chr11	1344204	A-T	HET
SBS	Chr11	19480115	C-G	HET
SBS	Chr2	11369858	G-A	Homo
SBS	Chr2	20537786	G-A	Homo
SBS	Chr2	20821615	C-T	HET
SBS	Chr2	20895932	T-C	Homo
SBS	Chr2	21215248	T-C	HET
SBS	Chr2	35904034	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g58770
SBS	Chr3	15029788	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os03g26280
SBS	Chr3	30377951	C-G	Homo
SBS	Chr4	29026005	T-C	HET
SBS	Chr6	17971417	G-T	Homo
SBS	Chr6	21708525	C-T	Homo
SBS	Chr6	27020559	G-T	Homo
SBS	Chr7	15832346	G-C	Homo
SBS	Chr7	9913519	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g16860
SBS	Chr8	13143542	A-T	HET
SBS	Chr8	14797742	C-T	HET
SBS	Chr8	19989899	C-T	HET
SBS	Chr8	8303236	C-A	Homo
SBS	Chr8	9620194	A-G	HET
SBS	Chr9	16642615	C-T	HET

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	5152563	5152567	4
Deletion	Chr6	5504572	5504576	4
Deletion	Chr8	6057377	6057382	5
Deletion	Chr10	8731801	8731808	7	LOC_Os10g17340
Deletion	Chr9	12683678	12683685	7
Deletion	Chr9	14605553	14605563	10	LOC_Os09g24520
Deletion	Chr11	14745392	14745394	2
Deletion	Chr7	15463031	15463033	2
Deletion	Chr1	19678135	19678139	4
Deletion	Chr7	21752948	21752950	2
Deletion	Chr5	21863696	21863697	1
Deletion	Chr1	22659313	22659326	13

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr3	31388674	31388691	18	LOC_Os03g55150
Insertion	Chr4	29937	29938	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	21924480	21924907
Inversion	Chr8	28208098	28208363

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	321321	Chr11	306935	2
Translocation	Chr5	13446076	Chr4	15938228	LOC_Os05g23500
Translocation	Chr4	17771619	Chr2	19422122
Translocation	Chr12	17802717	Chr7	11613699	LOC_Os12g29780
Translocation	Chr10	20240232	Chr7	27442118
Translocation	Chr10	20243960	Chr7	27442114	LOC_Os10g37820

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