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Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1054327	G-T	Homo
SBS	Chr1	19528233	A-G	Homo
SBS	Chr10	10626534	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g20990
SBS	Chr10	10626535	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g20990
SBS	Chr10	10626540	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g20990
SBS	Chr11	17538111	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g30170
SBS	Chr12	20399845	G-A	HET
SBS	Chr2	13788078	G-A	HET
SBS	Chr2	18647166	T-A	HET
SBS	Chr2	22749693	C-T	HET
SBS	Chr3	17054984	A-G	HET
SBS	Chr3	18817260	A-G	Homo
SBS	Chr3	23024106	G-A	HET
SBS	Chr3	29302680	C-T	HET
SBS	Chr3	31127660	C-T	HET
SBS	Chr3	31127669	G-C	HET
SBS	Chr3	32804122	A-G	HET
SBS	Chr3	35069909	G-A	Homo
SBS	Chr3	35144650	A-G	Homo
SBS	Chr4	15208581	C-T	HET
SBS	Chr4	16334071	C-T	HET
SBS	Chr4	6276224	C-A	HET
SBS	Chr4	7391704	C-T	HET
SBS	Chr4	7391705	C-T	HET
SBS	Chr5	18484737	T-C	HET
SBS	Chr6	28193084	A-G	HET
SBS	Chr6	8212931	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os06g14590
SBS	Chr7	27612049	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g46270
SBS	Chr7	28121878	G-T	HET
SBS	Chr8	9368134	C-T	HET
SBS	Chr8	9753069	G-A	Homo

Deletions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr1	2129647	2129650	3
Deletion	Chr3	3097302	3097306	4
Deletion	Chr3	3628885	3628900	15
Deletion	Chr8	4869368	4869369	1	LOC_Os08g08450
Deletion	Chr12	7811865	7811883	18
Deletion	Chr10	10587365	10587368	3
Deletion	Chr7	11465033	11465036	3
Deletion	Chr2	12312175	12312185	10	LOC_Os02g20830
Deletion	Chr10	16122912	16122919	7
Deletion	Chr7	16212077	16212081	4
Deletion	Chr1	16339286	16339297	11	LOC_Os01g29160
Deletion	Chr4	16410779	16410780	1	LOC_Os04g27760
Deletion	Chr8	17974723	17974733	10
Deletion	Chr3	20732983	20732990	7
Deletion	Chr9	21938761	21938762	1
Deletion	Chr9	21960487	21960490	3
Deletion	Chr1	23247542	23247552	10	LOC_Os01g41050
Deletion	Chr2	26856951	26856958	7
Deletion	Chr3	28813030	28813031	1
Deletion	Chr2	30166214	30166215	1

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr11	23868161	23868162	2
Insertion	Chr2	7458562	7458566	5
Insertion	Chr4	11244352	11244353	2
Insertion	Chr4	7947891	7947891	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	20493252	20493734

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr4	17213354	Chr1	14140977
Translocation	Chr8	20134517	Chr1	2999922	2

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