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Mutant Information

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	21874500	C-T	Homo
SBS	Chr1	39855407	T-C	Homo
SBS	Chr10	16100503	C-T	HET
SBS	Chr10	9667264	T-A	Homo	STOP_GAINED	LOC_Os10g18990
SBS	Chr11	23534434	G-T	HET
SBS	Chr11	9647831	C-T	Homo
SBS	Chr12	10599336	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g18350
SBS	Chr12	14970991	G-A	HET
SBS	Chr12	9406899	C-T	HET
SBS	Chr2	15519309	A-T	HET
SBS	Chr2	18820406	A-C	HET	NON_SYNONYMOUS_CODING	LOC_Os02g31860
SBS	Chr2	22013064	T-C	HET
SBS	Chr2	23445795	G-A	HET
SBS	Chr2	6520622	A-T	HET
SBS	Chr3	14288626	C-G	Homo
SBS	Chr3	17283786	G-A	Homo
SBS	Chr3	31922276	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g56050
SBS	Chr4	24920365	G-A	Homo
SBS	Chr4	27660979	T-C	HET
SBS	Chr4	31412998	A-G	HET
SBS	Chr5	10229204	T-C	Homo
SBS	Chr5	12423884	T-A	Homo
SBS	Chr5	27552853	C-T	HET
SBS	Chr6	29473021	T-G	HET
SBS	Chr6	317197	G-A	HET
SBS	Chr7	14221291	C-T	Homo
SBS	Chr7	9302815	G-A	Homo
SBS	Chr8	6808720	A-G	Homo
SBS	Chr9	9056304	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g15020

Deletions: 9

Variant Type	Chromosome	Start	End	Size (bp)
Deletion	Chr6	575571	575573	2
Deletion	Chr6	2216295	2216297	2
Deletion	Chr8	2964812	2964820	8
Deletion	Chr1	3713249	3713257	8
Deletion	Chr3	6510373	6510390	17
Deletion	Chr9	12104948	12104951	3
Deletion	Chr12	19073031	19073034	3
Deletion	Chr2	20497914	20497915	1
Deletion	Chr10	22947267	22947274	7

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	6984600	6984601	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	21058974	21064340	LOC_Os06g36020
Inversion	Chr6	21058997	21064345	LOC_Os06g36020

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2
Translocation	Chr8	9712766	Chr3	16768797
Translocation	Chr10	21405572	Chr3	24970473
Translocation	Chr10	21405646	Chr3	24971429

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