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Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	14594191	A-C	HET
SBS	Chr1	15225200	C-T	HET
SBS	Chr1	30435852	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g52930
SBS	Chr1	32572914	C-G	HET
SBS	Chr1	34312444	C-G	HET
SBS	Chr11	18069359	C-T	Homo
SBS	Chr11	24806233	A-T	HET
SBS	Chr11	25387930	A-G	HET
SBS	Chr12	13469108	C-T	Homo
SBS	Chr2	1163392	A-G	HET
SBS	Chr2	14737244	A-G	HET
SBS	Chr2	24213063	A-G	HET
SBS	Chr2	32456372	C-T	Homo
SBS	Chr3	24972335	C-A	Homo
SBS	Chr3	2736860	G-A	HET
SBS	Chr4	1553566	A-C	HET
SBS	Chr4	2276491	G-A	HET
SBS	Chr4	4929541	A-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g09270
SBS	Chr5	13708645	G-A	Homo
SBS	Chr5	16687219	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os05g28500
SBS	Chr5	4534287	C-G	Homo
SBS	Chr6	11892155	T-G	HET
SBS	Chr6	28723834	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os06g47400
SBS	Chr6	29595301	G-T	HET	STOP_GAINED	LOC_Os06g48870
SBS	Chr6	5975135	C-A	HET
SBS	Chr6	7991278	A-C	Homo
SBS	Chr7	24681293	G-A	HET
SBS	Chr7	27988433	T-C	HET
SBS	Chr7	4931905	G-T	HET
SBS	Chr8	5652305	T-C	HET
SBS	Chr9	1449362	C-T	HET
SBS	Chr9	20030521	A-G	HET
SBS	Chr9	9936428	G-A	HET

Deletions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	11225657	11225662	5
Deletion	Chr5	11926640	11926641	1	LOC_Os05g20340
Deletion	Chr7	13179342	13179346	4
Deletion	Chr11	16979001	17008000	28999	3
Deletion	Chr9	17265285	17265287	2
Deletion	Chr6	17570347	17570352	5
Deletion	Chr5	19872027	19872032	5
Deletion	Chr2	20406461	20406484	23
Deletion	Chr3	21133270	21133274	4
Deletion	Chr11	21142001	21175000	32999	4
Deletion	Chr11	21396399	21396401	2
Deletion	Chr5	23318722	23318724	2	LOC_Os05g39730
Deletion	Chr5	25615196	25615202	6

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	12849436	12849437	2
Insertion	Chr4	15715312	15715312	1
Insertion	Chr4	8368902	8368902	1

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	321056	417236	2
Inversion	Chr9	321570	417244	2
Inversion	Chr1	6974161	7733458	LOC_Os01g12660
Inversion	Chr1	6974163	7733459	LOC_Os01g12660
Inversion	Chr6	14079537	14115942	LOC_Os06g24070
Inversion	Chr6	14079756	14115945	LOC_Os06g24070

Translocations: 11

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	941581	Chr6	14079540	LOC_Os06g24070
Translocation	Chr9	941588	Chr7	26779842
Translocation	Chr9	944202	Chr7	26779841
Translocation	Chr9	944213	Chr6	14079748	LOC_Os06g24070
Translocation	Chr4	2730996	Chr2	6409694	2
Translocation	Chr11	4907894	Chr4	7638606	LOC_Os04g13690
Translocation	Chr9	7342493	Chr6	25650831
Translocation	Chr4	8179383	Chr1	16935414	2
Translocation	Chr11	17008536	Chr2	24634470
Translocation	Chr11	17009313	Chr2	24634475
Translocation	Chr12	17128911	Chr3	27794635

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