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Mutant Information

Variant Information

Single base substitutions: 37

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	11507296	T-A	HET
SBS	Chr1	11507298	C-A	HET
SBS	Chr1	11842852	T-A	HET
SBS	Chr1	12259660	G-A	HET
SBS	Chr1	32405606	G-A	Homo
SBS	Chr2	2220681	C-T	HET
SBS	Chr2	4398672	C-T	HET
SBS	Chr2	23358993	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g38650
SBS	Chr2	33964872	T-A	HET
SBS	Chr3	14498092	C-A	Homo
SBS	Chr3	20820286	G-A	Homo
SBS	Chr3	32676935	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os03g57290
SBS	Chr4	16780429	T-A	HET
SBS	Chr4	19147790	G-T	HET
SBS	Chr4	29841633	T-G	HET
SBS	Chr5	5087512	C-A	HET
SBS	Chr5	7538549	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os05g13590
SBS	Chr5	19213372	G-T	HET
SBS	Chr5	22707411	G-A	HET
SBS	Chr6	3076620	T-C	HET
SBS	Chr6	19331149	G-T	Homo
SBS	Chr7	8706159	G-A	HET
SBS	Chr7	28524366	C-T	Homo
SBS	Chr8	5997779	C-G	HET
SBS	Chr8	6690558	G-A	HET
SBS	Chr8	26428627	C-T	HET
SBS	Chr9	10329429	C-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g16910
SBS	Chr9	10362262	T-A	Homo
SBS	Chr10	9298284	C-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g18294
SBS	Chr10	11466070	G-A	Homo
SBS	Chr10	12959448	C-A	HET
SBS	Chr10	21685574	C-G	Homo
SBS	Chr11	2808687	G-A	HET
SBS	Chr11	7089067	C-T	Homo
SBS	Chr11	7089091	C-T	Homo
SBS	Chr11	15422360	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os11g26850
SBS	Chr12	18128598	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g30200

Deletions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr1	2718350	2718352	2
Deletion	Chr7	3514265	3514266	1
Deletion	Chr8	4252392	4252457	65
Deletion	Chr1	5338086	5338091	5
Deletion	Chr11	5673387	5673388	1
Deletion	Chr6	6156754	6156765	11
Deletion	Chr7	9124933	9124934	1	LOC_Os07g15700
Deletion	Chr10	9938600	9938620	20
Deletion	Chr9	10328860	10328874	14
Deletion	Chr8	10514672	10514680	8
Deletion	Chr7	11223619	11223621	2
Deletion	Chr1	11819839	11819848	9
Deletion	Chr4	12970954	12970955	1
Deletion	Chr4	14100707	14100708	1
Deletion	Chr1	23807578	23807598	20
Deletion	Chr1	30712427	30712429	2	LOC_Os01g53460
Deletion	Chr2	32564697	32564698	1

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	5150421	5150422	2

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	9566569	9566756

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	581708	Chr9	19096993
Translocation	Chr11	2560438	Chr1	22163478	LOC_Os01g39380
Translocation	Chr11	2560451	Chr1	22162818
Translocation	Chr12	15670185	Chr1	2952829	2

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