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Mutant Information

Variant Information

Single base substitutions: 22

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	34687136	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os01g60000
SBS	Chr2	29860305	G-A	HET
SBS	Chr2	29860309	G-A	HET
SBS	Chr3	9120538	A-T	HET
SBS	Chr3	19284511	G-A	HET
SBS	Chr3	25821799	A-G	HET
SBS	Chr4	410205	G-A	HET
SBS	Chr4	6017650	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g11070
SBS	Chr4	30157696	G-T	HET
SBS	Chr4	35408496	G-T	HET
SBS	Chr5	9367389	A-G	HET
SBS	Chr5	9879851	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os05g17260
SBS	Chr5	25568441	G-T	HET
SBS	Chr7	19734237	G-A	HET
SBS	Chr8	2125643	T-C	HET
SBS	Chr9	5152574	A-G	HET
SBS	Chr9	21239487	T-C	HET
SBS	Chr10	5110312	G-T	HET	STOP_GAINED	LOC_Os10g09470
SBS	Chr11	9433826	G-C	HET
SBS	Chr11	18328663	A-G	Homo
SBS	Chr12	6569728	G-C	HET
SBS	Chr12	16032745	A-T	Homo

Deletions: 6

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	2642849	2642852	3	LOC_Os03g05380
Deletion	Chr2	8888674	8888675	1
Deletion	Chr9	15354001	15377000	22999	3
Deletion	Chr11	24675293	24675294	1
Deletion	Chr6	26942951	26942952	1
Deletion	Chr2	31761001	32062000	300999	54

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr6	1886472	1886638	167

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	21318565	21493579	LOC_Os09g37230
Inversion	Chr9	21318599	21493579	LOC_Os09g37230
Inversion	Chr4	30843628	31145266	LOC_Os04g51960

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	5158122	Chr4	19385982	LOC_Os04g32340
Translocation	Chr8	9700385	Chr5	22608731
Translocation	Chr12	9802829	Chr6	7521453
Translocation	Chr10	12860090	Chr2	16818187	LOC_Os10g24980
Translocation	Chr8	16921182	Chr4	12564747
Translocation	Chr4	30843649	Chr2	2643651	2

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