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Mutant Information

Variant Information

Single base substitutions: 20

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1135083	C-T	HET
SBS	Chr1	14686193	A-C	HET
SBS	Chr10	10551275	T-A	HET
SBS	Chr10	21076209	A-T	HET
SBS	Chr11	12839507	G-A	Homo
SBS	Chr11	13398814	C-A	HET	STOP_GAINED	LOC_Os11g23236
SBS	Chr12	22795085	C-A	Homo
SBS	Chr2	15920634	G-A	HET	SPLICE_SITE_ACCEPTOR	LOC_Os02g27080
SBS	Chr2	17652299	T-C	HET
SBS	Chr2	26304188	T-G	Homo
SBS	Chr3	30235723	G-T	Homo
SBS	Chr4	11642938	C-T	HET
SBS	Chr4	15426117	G-A	HET
SBS	Chr4	31680084	A-T	HET
SBS	Chr5	9587482	A-T	Homo
SBS	Chr6	14191274	T-C	HET
SBS	Chr6	24791993	G-A	Homo
SBS	Chr8	24803467	T-A	Homo
SBS	Chr8	24954969	G-A	Homo
SBS	Chr9	7175882	G-T	HET

Deletions: 10

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	174468	174477	9
Deletion	Chr1	10058841	10058846	5	LOC_Os01g17980
Deletion	Chr11	22377158	22377172	14
Deletion	Chr3	22859827	22859829	2
Deletion	Chr12	24459571	24459583	12	LOC_Os12g39630
Deletion	Chr6	24887298	24887332	34
Deletion	Chr8	26480944	26480960	16
Deletion	Chr1	29047571	29047573	2
Deletion	Chr3	34920213	34920220	7	LOC_Os03g61580
Deletion	Chr1	41677799	41677802	3

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	41674776	41674777	2
Insertion	Chr12	11626172	11626223	52
Insertion	Chr4	3853765	3853767	3	LOC_Os04g07260
Insertion	Chr4	4697248	4697311	64
Insertion	Chr4	8996999	8996999	1
Insertion	Chr5	14584883	14584892	10

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	14880890	15326872	LOC_Os10g29495
Inversion	Chr10	14880901	15326891	LOC_Os10g29495
Inversion	Chr2	30165060	30451530	LOC_Os02g49370
Inversion	Chr2	30165068	30509181	LOC_Os02g49370

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	3399134	Chr4	14875918

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