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Mutant Information

Variant Information

Single base substitutions: 22

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	15925481	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os01g28420
SBS	Chr1	15925482	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os01g28420
SBS	Chr1	16286835	G-A	HET
SBS	Chr1	40685653	T-A	Homo
SBS	Chr2	2794521	T-A	HET
SBS	Chr2	22406046	G-T	Homo
SBS	Chr2	28942682	A-G	HET	SPLICE_SITE_DONOR	LOC_Os02g47410
SBS	Chr3	1027327	T-A	HET
SBS	Chr3	9768688	A-T	HET
SBS	Chr3	28083384	C-T	HET
SBS	Chr4	5846156	A-C	Homo
SBS	Chr4	10792584	C-T	Homo
SBS	Chr6	5482156	C-T	HET
SBS	Chr6	5482160	T-A	HET
SBS	Chr7	18248375	G-A	Homo
SBS	Chr8	13203019	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os08g22006
SBS	Chr9	6162278	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g11110
SBS	Chr9	12606230	G-A	HET
SBS	Chr10	5486005	T-A	HET
SBS	Chr10	7827193	T-C	HET
SBS	Chr10	16866769	T-A	Homo
SBS	Chr12	141092	C-A	Homo

Deletions: 6

Variant Type	Chromosome	Start	End	Size (bp)
Deletion	Chr3	4753527	4753532	5
Deletion	Chr7	8034805	8034806	1
Deletion	Chr8	10480847	10480849	2
Deletion	Chr11	15217101	15217102	1
Deletion	Chr9	18993499	18993505	6
Deletion	Chr12	20174944	20174948	4

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	2567681	2567682	2
Insertion	Chr2	26840177	26840177	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	16285748	16915797	2

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	14392055	Chr6	13904102
Translocation	Chr8	14538891	Chr2	21673903
Translocation	Chr8	22763427	Chr6	10540413	2
Translocation	Chr11	26960166	Chr5	27709523	LOC_Os11g44590

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