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Mutant Information

Variant Information

Single base substitutions: 39

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	18334722	T-C	Homo
SBS	Chr1	26156834	C-G	Homo
SBS	Chr1	37393110	A-G	HET
SBS	Chr2	2747281	C-T	HET
SBS	Chr2	4114299	T-C	HET
SBS	Chr2	21610473	A-G	HET
SBS	Chr2	24385641	C-G	HET
SBS	Chr2	29161873	A-G	HET
SBS	Chr3	26760932	A-C	HET
SBS	Chr3	28704486	C-A	HET
SBS	Chr3	28810927	A-G	HET
SBS	Chr3	29406493	T-A	HET
SBS	Chr3	32118392	C-T	HET
SBS	Chr4	7326673	C-A	HET
SBS	Chr4	10455790	C-G	HET
SBS	Chr4	33728148	C-T	HET
SBS	Chr5	7894893	G-A	HET
SBS	Chr5	13000147	T-C	HET
SBS	Chr5	13892742	G-A	HET
SBS	Chr5	16745356	G-A	HET
SBS	Chr5	20297767	T-A	HET
SBS	Chr6	13872478	T-G	Homo
SBS	Chr7	11449406	T-G	Homo
SBS	Chr8	11021067	C-T	HET
SBS	Chr8	18888357	T-C	HET
SBS	Chr9	4734544	C-T	Homo
SBS	Chr9	8732988	C-G	Homo
SBS	Chr9	10157755	G-C	Homo
SBS	Chr9	15547202	T-A	HET	STOP_GAINED	LOC_Os09g25900
SBS	Chr9	21294705	G-A	HET
SBS	Chr10	4399647	C-T	Homo
SBS	Chr10	8392024	G-A	HET
SBS	Chr10	14702060	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g28260
SBS	Chr10	22628808	C-T	Homo
SBS	Chr11	21228000	A-T	HET
SBS	Chr11	24433905	C-T	HET
SBS	Chr12	207633	T-C	Homo
SBS	Chr12	16351059	C-T	Homo
SBS	Chr12	26329543	C-G	Homo

Deletions: 17

Variant Type	Chromosome	Start	End	Size (bp)
Deletion	Chr12	1731907	1731911	4
Deletion	Chr10	3350685	3350686	1
Deletion	Chr6	6101726	6101733	7
Deletion	Chr3	7165996	7166002	6
Deletion	Chr11	8370787	8370789	2
Deletion	Chr8	9329476	9329481	5
Deletion	Chr2	9875328	9875331	3
Deletion	Chr4	11878003	11878005	2
Deletion	Chr12	11979507	11979661	154
Deletion	Chr11	17975281	17975282	1
Deletion	Chr7	18423463	18423467	4
Deletion	Chr1	21722280	21722295	15
Deletion	Chr2	22019916	22019918	2
Deletion	Chr1	27889537	27889555	18
Deletion	Chr6	29496251	29496256	5
Deletion	Chr2	31336745	31336780	35
Deletion	Chr3	36347442	36347444	2

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr11	28547744	28547745	2
Insertion	Chr11	11307413	11307414	2

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	15765861	15953676
Inversion	Chr1	15765872	15953676
Inversion	Chr9	20047946	20048373	LOC_Os09g33960
Inversion	Chr8	23585775	23651108	LOC_Os08g37390
Inversion	Chr8	23585796	23651250
Inversion	Chr8	27288744	27288849	LOC_Os08g43130

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	11709917	Chr2	18066714	LOC_Os10g22570
Translocation	Chr11	17890250	Chr9	4630672
Translocation	Chr8	23651230	Chr2	20793878	LOC_Os02g34660
Translocation	Chr12	24881483	Chr5	14734171	LOC_Os05g25370

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