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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1885418	G-A	HET
SBS	Chr1	35672888	G-A	HET
SBS	Chr1	4302732	G-A	HET
SBS	Chr11	13167620	G-A	HET
SBS	Chr11	28850233	C-T	HET
SBS	Chr12	10750396	C-T	HET
SBS	Chr12	10750397	C-T	HET
SBS	Chr2	35294703	T-G	HET
SBS	Chr2	6563676	T-C	HET
SBS	Chr2	6563681	T-A	HET
SBS	Chr3	13778570	A-G	Homo
SBS	Chr3	14598140	G-A	Homo
SBS	Chr3	32759219	A-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os03g57460
SBS	Chr3	3346071	C-A	HET
SBS	Chr3	8946347	G-A	HET
SBS	Chr3	8946350	T-A	HET
SBS	Chr3	8946351	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g16220
SBS	Chr4	14368989	A-C	Homo
SBS	Chr4	16053863	C-T	Homo
SBS	Chr4	31537848	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os04g52940
SBS	Chr4	9304176	A-C	Homo
SBS	Chr5	28275823	A-G	Homo
SBS	Chr6	12013937	A-T	HET
SBS	Chr6	5682422	T-A	HET
SBS	Chr8	12808071	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os08g21490
SBS	Chr8	23227320	G-A	HET
SBS	Chr8	24382044	T-A	HET
SBS	Chr8	5158216	A-G	HET
SBS	Chr8	7039752	C-A	Homo
SBS	Chr9	17071614	T-C	HET

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	5501700	5501702	2
Deletion	Chr8	7753033	7753035	2
Deletion	Chr3	8618001	8654000	35999	7
Deletion	Chr7	11071052	11071053	1
Deletion	Chr1	12019426	12019432	6
Deletion	Chr4	13001001	13130000	128999	17
Deletion	Chr10	13117777	13117779	2
Deletion	Chr5	14981357	14981358	1	LOC_Os05g25750
Deletion	Chr2	18953173	18953177	4
Deletion	Chr9	20591179	20591181	2
Deletion	Chr2	22191428	22191432	4
Deletion	Chr11	22396959	22396975	16	LOC_Os11g37820
Deletion	Chr5	22793460	22793476	16
Deletion	Chr3	32991376	32991393	17
Deletion	Chr1	38997653	38997658	5

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr8	3495549	3495550	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	4314152	4314695
Inversion	Chr2	4583525	4694168	LOC_Os02g09150

Translocations: 11

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	2796358	Chr3	4896421	2
Translocation	Chr10	2796362	Chr3	4897842	LOC_Os10g05600
Translocation	Chr11	4314691	Chr1	9799614
Translocation	Chr11	4315123	Chr1	9799616	LOC_Os11g08220
Translocation	Chr2	4583551	Chr1	23659502
Translocation	Chr2	4694180	Chr1	23661947	LOC_Os02g09150
Translocation	Chr8	5559377	Chr3	22748055	LOC_Os08g09600
Translocation	Chr8	5569097	Chr3	22748052
Translocation	Chr10	10311881	Chr4	5525974
Translocation	Chr9	16940182	Chr1	23674397	LOC_Os01g41810
Translocation	Chr10	22890526	Chr6	18908693

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