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Mutant Information

Variant Information

Single base substitutions: 20

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	26418162	G-T	Homo
SBS	Chr1	27886366	C-T	Homo
SBS	Chr10	7646067	C-T	HET
SBS	Chr10	8658139	C-A	HET
SBS	Chr11	26656563	C-A	Homo
SBS	Chr11	26656584	G-A	Homo
SBS	Chr11	3019016	C-T	Homo
SBS	Chr12	17917302	C-T	HET
SBS	Chr4	19300165	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g32190
SBS	Chr4	29484845	A-T	HET
SBS	Chr4	33297600	G-A	HET
SBS	Chr6	24377401	G-A	HET
SBS	Chr6	30937937	C-A	HET
SBS	Chr8	13594575	T-A	HET
SBS	Chr8	13663183	G-A	HET
SBS	Chr8	25029899	C-T	HET
SBS	Chr8	27746761	C-T	Homo
SBS	Chr8	6382353	T-G	Homo
SBS	Chr9	1997380	G-A	HET
SBS	Chr9	9493142	T-G	HET

Deletions: 10

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	573248	573261	13	LOC_Os08g01930
Deletion	Chr11	4820548	4820562	14
Deletion	Chr3	4945776	4946027	251
Deletion	Chr4	5813364	5813368	4
Deletion	Chr8	6969192	6969202	10	LOC_Os08g11890
Deletion	Chr5	9008001	9055000	46999	9
Deletion	Chr6	17563517	17563519	2
Deletion	Chr3	19455637	19455890	253
Deletion	Chr11	21896377	21896378	1
Deletion	Chr3	35314662	35314665	3	LOC_Os03g62340

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr4	7961462	7961462	1
Insertion	Chr5	169904	169911	8
Insertion	Chr7	22107082	22107085	4

No Inversion

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	27105519	Chr4	18553479	LOC_Os04g31040

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