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Mutant Information

Variant Information

Single base substitutions: 26

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	15042268	T-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g27000
SBS	Chr1	38766325	C-T	HET
SBS	Chr10	15274133	C-T	HET
SBS	Chr11	17824527	C-T	Homo
SBS	Chr12	9748367	G-T	Homo
SBS	Chr2	10514723	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g18100
SBS	Chr2	11370931	C-T	HET
SBS	Chr2	11560219	C-A	HET
SBS	Chr2	12139493	C-T	HET
SBS	Chr2	8040551	A-T	HET
SBS	Chr3	12735952	C-T	HET
SBS	Chr3	23273681	C-T	Homo
SBS	Chr3	24680910	G-A	Homo
SBS	Chr3	31851414	G-A	HET
SBS	Chr4	28379206	C-G	HET
SBS	Chr5	18440538	A-T	Homo
SBS	Chr5	445769	G-A	Homo
SBS	Chr6	29045150	A-G	HET
SBS	Chr6	30087544	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os06g49740
SBS	Chr7	10833372	G-A	HET
SBS	Chr7	26227436	A-T	Homo
SBS	Chr7	8472918	A-G	HET
SBS	Chr8	20471527	A-T	HET
SBS	Chr8	8807498	C-T	HET
SBS	Chr8	9768954	C-A	HET
SBS	Chr9	22497118	C-T	HET

Deletions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	799285	799312	27
Deletion	Chr3	1636478	1636480	2
Deletion	Chr7	2174607	2174617	10
Deletion	Chr9	8773001	8784000	10999	LOC_Os09g14760
Deletion	Chr12	10402636	10402641	5
Deletion	Chr7	10872440	10872462	22	LOC_Os07g18350
Deletion	Chr11	11636324	11636326	2
Deletion	Chr5	14767388	14767395	7
Deletion	Chr1	18112461	18112472	11
Deletion	Chr5	18706226	18706251	25
Deletion	Chr7	20038938	20038939	1
Deletion	Chr5	24003421	24003433	12
Deletion	Chr4	24592705	24592707	2
Deletion	Chr7	25533184	25533210	26
Deletion	Chr7	26191709	26191717	8
Deletion	Chr2	27413570	27413580	10
Deletion	Chr3	28811875	28811893	18
Deletion	Chr2	29499039	29499041	2
Deletion	Chr4	30630528	30630533	5	LOC_Os04g51700
Deletion	Chr1	38040632	38040638	6

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	10136134	10136135	2
Insertion	Chr10	348650	348651	2
Insertion	Chr5	11128475	11128478	4
Insertion	Chr6	20150242	20150247	6	LOC_Os06g34670
Insertion	Chr9	10600756	10600757	2

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	9430500	9527593
Inversion	Chr8	9430502	9527600
Inversion	Chr11	17325322	17325523
Inversion	Chr4	21187733	21471031
Inversion	Chr4	21192910	21471031
Inversion	Chr4	30287437	30287747	LOC_Os04g51150

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	8768804	Chr2	25208042
Translocation	Chr9	8784588	Chr2	25208050
Translocation	Chr6	9705267	Chr3	19365757
Translocation	Chr6	9705466	Chr3	19365754
Translocation	Chr12	19665637	Chr6	5470	2
Translocation	Chr12	22604927	Chr6	5470	2

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