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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	29925510	C-A	HET
SBS	Chr1	31450904	G-A	HET
SBS	Chr1	6284008	A-T	Homo
SBS	Chr10	11683368	C-T	Homo
SBS	Chr10	14901942	G-A	HET
SBS	Chr10	3240148	G-T	HET	SPLICE_SITE_ACCEPTOR	LOC_Os10g06300
SBS	Chr11	23451461	A-G	HET
SBS	Chr12	10301005	T-C	Homo
SBS	Chr2	18725504	T-G	Homo
SBS	Chr2	26091475	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g43290
SBS	Chr3	5776600	T-C	Homo
SBS	Chr3	5776605	T-C	Homo
SBS	Chr3	5776613	A-T	Homo
SBS	Chr3	8992475	G-T	Homo
SBS	Chr4	32556711	C-T	HET
SBS	Chr4	5264337	T-C	Homo
SBS	Chr5	11145332	C-T	HET
SBS	Chr6	1986473	G-T	Homo
SBS	Chr6	24295845	A-C	HET
SBS	Chr6	27091270	C-T	HET
SBS	Chr6	31131620	C-G	Homo
SBS	Chr7	10464673	G-A	HET
SBS	Chr8	12282952	C-T	Homo
SBS	Chr8	17768771	C-T	Homo
SBS	Chr9	13323995	C-G	HET
SBS	Chr9	13812964	T-C	Homo
SBS	Chr9	5434903	G-A	HET

Deletions: 10

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	2688349	2688354	5
Deletion	Chr8	4668863	4668870	7
Deletion	Chr1	6984091	6984093	2
Deletion	Chr11	10943380	10943387	7
Deletion	Chr8	12180207	12180210	3
Deletion	Chr9	15232558	15232559	1
Deletion	Chr6	17794500	17794508	8
Deletion	Chr1	25812639	25812640	1	LOC_Os01g45500
Deletion	Chr2	26238486	26238500	14
Deletion	Chr1	35974932	35974935	3

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	22800878	22800880	3	LOC_Os05g38860
Insertion	Chr9	2935867	2935867	1
Insertion	Chr9	9768729	9768734	6

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	29681299	29878397	LOC_Os01g51640
Inversion	Chr1	29681300	30531426	LOC_Os01g51640

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	7424769	Chr8	12246174	LOC_Os08g20390
Translocation	Chr7	12281597	Chr1	30943066
Translocation	Chr7	24503171	Chr1	28250777	LOC_Os01g49160
Translocation	Chr7	24507886	Chr1	28250657	2

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