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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	34422526	G-A	HET
SBS	Chr1	35731286	C-T	HET
SBS	Chr1	37797230	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os01g65110
SBS	Chr1	9511865	G-T	HET
SBS	Chr10	16361754	G-A	HET
SBS	Chr10	19804300	T-C	HET
SBS	Chr10	8332065	G-T	HET
SBS	Chr12	16136824	G-A	Homo
SBS	Chr12	22425806	A-G	HET
SBS	Chr12	24478945	G-A	HET
SBS	Chr12	5305303	G-A	HET
SBS	Chr2	1420408	A-G	HET
SBS	Chr2	33395041	C-A	HET
SBS	Chr2	600551	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g02060
SBS	Chr3	20324813	A-T	HET
SBS	Chr3	23074109	G-T	HET
SBS	Chr4	13323934	G-A	HET
SBS	Chr4	8670843	G-A	HET
SBS	Chr5	9236744	G-C	HET
SBS	Chr7	11457781	G-A	Homo
SBS	Chr7	8760384	C-A	HET
SBS	Chr8	103468	T-A	HET
SBS	Chr8	18499795	G-T	Homo
SBS	Chr8	20694409	G-T	HET
SBS	Chr9	15484805	G-T	HET

Deletions: 26

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	36572	36580	8	LOC_Os03g01050
Deletion	Chr10	755684	755699	15
Deletion	Chr8	2480038	2480052	14
Deletion	Chr8	4082047	4082048	1
Deletion	Chr6	4566474	4566481	7
Deletion	Chr1	5181008	5181009	1	LOC_Os01g09960
Deletion	Chr9	5341070	5341073	3
Deletion	Chr11	7066428	7066433	5
Deletion	Chr8	9462835	9462851	16
Deletion	Chr6	9753001	9764000	10999	3
Deletion	Chr6	9783001	9933000	149999	22
Deletion	Chr4	10110703	10110704	1	LOC_Os04g18310
Deletion	Chr3	13064345	13064347	2
Deletion	Chr3	13951120	13951123	3
Deletion	Chr12	14000892	14000907	15
Deletion	Chr9	17083546	17083549	3
Deletion	Chr7	20130920	20130935	15	LOC_Os07g33690
Deletion	Chr6	21953737	21953749	12
Deletion	Chr3	22529752	22529753	1
Deletion	Chr8	23162023	23162024	1	LOC_Os08g36710
Deletion	Chr11	23418091	23418094	3	LOC_Os11g39330
Deletion	Chr3	25418087	25418099	12	LOC_Os03g45030
Deletion	Chr6	26764687	26764688	1
Deletion	Chr3	26959598	26959602	4
Deletion	Chr4	32489195	32489204	9
Deletion	Chr4	33903909	33903920	11

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	2694374	2694573	200
Insertion	Chr12	26466250	26466250	1
Insertion	Chr2	20292057	20292134	78
Insertion	Chr4	1058037	1058044	8

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	4505764	4721276
Inversion	Chr3	9259208	9474938
Inversion	Chr10	22118263	22655681	LOC_Os10g41170
Inversion	Chr10	22118281	22656249	LOC_Os10g41170
Inversion	Chr2	25891564	26230519	LOC_Os02g43010

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	13993045	Chr9	3625213	LOC_Os09g07320
Translocation	Chr10	22655703	Chr6	31220527
Translocation	Chr10	22656232	Chr6	31220554
Translocation	Chr11	27626390	Chr6	9802013

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