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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	22575042	T-A	Homo
SBS	Chr1	27228929	G-A	HET
SBS	Chr1	27533065	C-T	HET
SBS	Chr10	12407415	C-T	Homo
SBS	Chr10	8504306	G-A	Homo
SBS	Chr11	11179822	G-A	Homo
SBS	Chr11	1211775	C-G	HET
SBS	Chr11	16137622	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os11g28070
SBS	Chr11	17845764	C-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g30650
SBS	Chr11	22813611	T-C	Homo
SBS	Chr11	28839669	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os11g47820
SBS	Chr12	16482486	G-A	Homo	SPLICE_SITE_DONOR	LOC_Os12g27950
SBS	Chr2	26392004	C-T	Homo
SBS	Chr4	31871192	C-T	Homo
SBS	Chr5	14644252	G-T	Homo
SBS	Chr5	18878657	C-G	Homo
SBS	Chr5	20121764	C-A	Homo
SBS	Chr5	20121765	A-T	Homo
SBS	Chr5	20121789	G-T	Homo
SBS	Chr6	20398595	G-T	HET
SBS	Chr6	6882286	G-A	Homo
SBS	Chr7	18226425	G-A	Homo
SBS	Chr7	7645494	G-A	Homo
SBS	Chr9	4018815	C-G	HET
SBS	Chr9	825937	G-C	HET

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	1229547	1229557	10
Deletion	Chr11	5432595	5432598	3
Deletion	Chr8	7641214	7641219	5
Deletion	Chr8	8411594	8411597	3
Deletion	Chr1	10631644	10631645	1
Deletion	Chr12	13200218	13200219	1
Deletion	Chr11	16809509	16809572	63
Deletion	Chr1	18915877	18915879	2
Deletion	Chr3	19455637	19455890	253
Deletion	Chr7	21262464	21262465	1
Deletion	Chr2	25922001	25976000	53999	9
Deletion	Chr1	39356517	39356521	4

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr12	19836143	19836143	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	16851564	16923787
Inversion	Chr8	27435047	27690893

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	9951551	Chr6	20870998
Translocation	Chr11	27806918	Chr6	9599987	LOC_Os11g45960
Translocation	Chr4	29635200	Chr1	38797770

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