Search Results

Mutant Information

Variant Information

Single base substitutions: 34

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	4557094	G-A	HET
SBS	Chr1	5610753	T-A	HET
SBS	Chr1	7722511	C-T	HET
SBS	Chr1	12515057	G-A	HET
SBS	Chr1	13853408	A-T	HET
SBS	Chr1	30073551	C-T	HET
SBS	Chr2	10314924	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g17830
SBS	Chr2	10314925	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g17830
SBS	Chr2	10315088	C-A	HET
SBS	Chr2	17746307	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g29850
SBS	Chr2	25308921	G-A	Homo
SBS	Chr3	3051814	A-C	HET
SBS	Chr3	5531093	A-G	HET
SBS	Chr3	30354024	C-T	HET
SBS	Chr3	32845011	A-C	HET
SBS	Chr3	35442829	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os03g62620
SBS	Chr4	1343777	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g03190
SBS	Chr4	3144301	A-T	HET
SBS	Chr5	6198920	C-G	HET
SBS	Chr5	29675088	G-A	HET
SBS	Chr6	8256427	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os06g14680
SBS	Chr6	24066549	G-A	HET
SBS	Chr6	25760445	C-A	HET
SBS	Chr7	22796151	G-C	HET
SBS	Chr8	12516702	G-T	HET
SBS	Chr8	23038998	A-T	HET
SBS	Chr9	8362693	A-C	HET
SBS	Chr9	8368241	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os09g14120
SBS	Chr9	8368246	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g14120
SBS	Chr9	8372286	T-C	HET
SBS	Chr9	9539162	A-T	HET
SBS	Chr10	18162556	C-T	HET
SBS	Chr11	4596728	A-G	HET
SBS	Chr11	20646499	G-A	Homo

Deletions: 23

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	2530966	2530970	4
Deletion	Chr12	3298419	3298428	9	LOC_Os12g06800
Deletion	Chr1	5928001	6113000	184999	25
Deletion	Chr6	7687801	7687804	3
Deletion	Chr9	8617001	8674000	56999	9
Deletion	Chr9	8676001	8797000	120999	16
Deletion	Chr9	8849001	8926000	76999	8
Deletion	Chr8	9444916	9444917	1
Deletion	Chr3	12960728	12960749	21
Deletion	Chr5	13832952	13832959	7
Deletion	Chr9	13954021	13954030	9	LOC_Os09g23480
Deletion	Chr9	13956001	14000000	43999	8
Deletion	Chr7	15576573	15576575	2
Deletion	Chr5	18866001	18984000	117999	16
Deletion	Chr11	20182173	20182181	8
Deletion	Chr7	21001447	21001449	2
Deletion	Chr7	21302318	21302325	7
Deletion	Chr5	22309330	22309344	14
Deletion	Chr12	23522759	23522768	9
Deletion	Chr2	25309820	25309822	2
Deletion	Chr3	27079216	27079219	3
Deletion	Chr4	27476255	27476257	2
Deletion	Chr3	33024592	33024593	1

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	6947800	6947800	1
Insertion	Chr6	8656151	8656295	145

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	8522651	9117435
Inversion	Chr7	14640876	14641785	LOC_Os07g25550
Inversion	Chr7	14640880	14645236	LOC_Os07g25550

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	4713417	Chr1	28394490	LOC_Os08g08240
Translocation	Chr9	7054888	Chr6	22683300
Translocation	Chr11	15950035	Chr1	14847997
Translocation	Chr8	16559918	Chr1	568338	2

Main menu