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Mutant Information

Variant Information

Single base substitutions: 21

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	40500571	C-A	Homo
SBS	Chr1	40646355	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g70210
SBS	Chr2	21874259	G-A	Homo
SBS	Chr3	9151197	T-G	HET
SBS	Chr3	10125798	G-T	HET
SBS	Chr3	20337903	T-C	HET
SBS	Chr4	5719742	C-T	HET
SBS	Chr4	10791099	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g19380
SBS	Chr4	12462085	C-T	HET
SBS	Chr4	28230201	G-A	Homo
SBS	Chr6	4003917	C-T	HET
SBS	Chr6	15489797	G-A	HET
SBS	Chr7	1430024	G-A	HET
SBS	Chr7	4633953	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g08910
SBS	Chr7	4753262	T-A	HET
SBS	Chr7	27709575	A-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g46440
SBS	Chr9	6029287	G-T	HET
SBS	Chr9	19715313	A-G	Homo
SBS	Chr10	112271	G-C	HET
SBS	Chr10	20410102	G-A	Homo
SBS	Chr11	17939232	A-T	HET

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	1081766	1081767	1
Deletion	Chr5	1114506	1114515	9
Deletion	Chr11	1820001	1831000	10999	3
Deletion	Chr6	3691001	3704000	12999	3
Deletion	Chr8	8220599	8220600	1	LOC_Os08g13790
Deletion	Chr4	9824713	9824714	1	LOC_Os04g17880
Deletion	Chr12	12944126	12944133	7
Deletion	Chr2	22184920	22184921	1
Deletion	Chr3	24276818	24276833	15
Deletion	Chr3	28461453	28461454	1	LOC_Os03g49910
Deletion	Chr7	29379965	29379996	31
Deletion	Chr1	31210082	31210088	6

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr4	25697189	25697195	7

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	619510	747974	LOC_Os11g02200
Inversion	Chr11	619588	948640	2

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	12162574	Chr9	787952
Translocation	Chr2	16489462	Chr1	26061488	2

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