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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	15039073	G-A	HET
SBS	Chr1	24844952	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os01g43420
SBS	Chr1	31745819	C-A	HET
SBS	Chr1	38603793	C-T	HET
SBS	Chr2	19987402	T-C	HET
SBS	Chr2	28432381	G-A	HET
SBS	Chr3	20375951	G-A	HET
SBS	Chr3	26781870	G-A	HET
SBS	Chr4	1141181	T-C	HET
SBS	Chr4	13683680	G-T	Homo
SBS	Chr4	14704289	C-T	Homo
SBS	Chr4	23381239	G-A	Homo
SBS	Chr5	12879183	G-A	HET
SBS	Chr6	1496513	A-C	HET
SBS	Chr6	17948567	A-T	HET
SBS	Chr6	19726993	G-A	HET
SBS	Chr6	29117040	T-C	HET
SBS	Chr8	21931447	C-T	HET
SBS	Chr9	2620088	T-C	HET
SBS	Chr9	8383734	T-C	HET
SBS	Chr10	13456812	C-T	Homo
SBS	Chr10	18825916	T-A	HET
SBS	Chr11	1504528	A-T	HET
SBS	Chr11	1797431	T-C	HET
SBS	Chr11	1797436	C-G	HET

Deletions: 8

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	176663	176666	3	LOC_Os05g01250
Deletion	Chr4	5758413	5758416	3
Deletion	Chr3	6156916	6156930	14
Deletion	Chr8	7950001	7964000	13999	3
Deletion	Chr7	11332895	11332896	1	LOC_Os07g19140
Deletion	Chr7	15892136	15892143	7
Deletion	Chr4	21179046	21179063	17	LOC_Os04g34880
Deletion	Chr1	25163001	25287000	123999	18

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr8	23324569	23324569	1
Insertion	Chr4	16920537	16920537	1
Insertion	Chr4	23681220	23681220	1

Inversions: 10

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	5085306	5085421
Inversion	Chr8	7716578	7716722	LOC_Os08g12990
Inversion	Chr9	8570698	8570844	LOC_Os09g14490
Inversion	Chr8	8720237	8720481
Inversion	Chr8	10698610	10698780	LOC_Os08g17470
Inversion	Chr10	16006534	16006894
Inversion	Chr1	17221630	17221865
Inversion	Chr9	19874846	19875039	LOC_Os09g33650
Inversion	Chr7	26369975	26508136	LOC_Os07g44360
Inversion	Chr7	26369976	26508113	LOC_Os07g44360

Translocations: 14

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	697385	Chr11	650623
Translocation	Chr7	3694488	Chr4	3213549
Translocation	Chr6	4820916	Chr5	5212060	2
Translocation	Chr10	12447915	Chr5	15461706
Translocation	Chr4	14131681	Chr3	22684703	2
Translocation	Chr4	14131690	Chr3	22684994	2
Translocation	Chr8	16402521	Chr5	10628750
Translocation	Chr12	17802716	Chr7	11613747	LOC_Os12g29780
Translocation	Chr10	18184212	Chr1	24311709
Translocation	Chr10	21246113	Chr1	18517974	LOC_Os10g39750
Translocation	Chr10	22607985	Chr7	25127261	LOC_Os10g42040
Translocation	Chr11	22922301	Chr6	1553353
Translocation	Chr6	23399511	Chr5	365671	LOC_Os05g01610
Translocation	Chr4	26079868	Chr3	22522068	2

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