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Mutant Information

Variant Information

Single base substitutions: 26

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1141263	G-C	HET
SBS	Chr1	4835718	G-A	Homo
SBS	Chr1	15312332	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g27430
SBS	Chr1	17342858	T-A	Homo
SBS	Chr1	34342141	G-A	HET
SBS	Chr1	37947448	C-T	HET
SBS	Chr2	4061452	G-T	HET
SBS	Chr2	32403610	T-C	HET
SBS	Chr3	30778885	T-A	HET
SBS	Chr4	21666845	G-A	HET
SBS	Chr5	12881608	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os05g22700
SBS	Chr6	1239912	G-A	Homo
SBS	Chr6	16395871	A-G	HET
SBS	Chr7	1558076	C-A	HET
SBS	Chr7	17299917	C-T	HET
SBS	Chr8	11078478	C-T	HET
SBS	Chr8	12818162	G-A	HET
SBS	Chr8	18279583	A-T	Homo
SBS	Chr9	6504595	T-C	Homo
SBS	Chr9	16515567	C-T	HET
SBS	Chr10	7556702	A-G	HET
SBS	Chr10	14713851	A-T	HET
SBS	Chr10	14845513	A-G	HET
SBS	Chr11	5634389	G-A	HET
SBS	Chr11	14051367	C-T	HET
SBS	Chr12	12251372	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g21780

Deletions: 10

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	6248123	6248124	1
Deletion	Chr1	8746401	8746402	1	LOC_Os01g15550
Deletion	Chr12	11875001	11965000	89999	13
Deletion	Chr6	14548171	14548173	2
Deletion	Chr8	15934423	15934426	3
Deletion	Chr4	16349894	16349904	10
Deletion	Chr4	22888775	22888785	10
Deletion	Chr3	23441852	23441859	7
Deletion	Chr7	27872432	27872441	9
Deletion	Chr1	28213292	28213313	21

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr12	13047746	13047746	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	14019107	14403706
Inversion	Chr8	14019118	14403712

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	2828026	Chr8	14403712
Translocation	Chr12	13545259	Chr4	6233521	LOC_Os04g11410
Translocation	Chr12	20935701	Chr2	10797975

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