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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	407446	T-G	HET
SBS	Chr1	18121762	A-T	HET
SBS	Chr1	18121764	A-G	HET
SBS	Chr1	27379457	C-A	Homo
SBS	Chr1	27379459	T-A	Homo
SBS	Chr1	41387482	G-A	HET
SBS	Chr2	9050005	C-T	Homo
SBS	Chr2	9857612	A-C	Homo
SBS	Chr2	34209999	T-A	Homo
SBS	Chr3	20120264	G-A	HET
SBS	Chr3	27841631	C-T	HET
SBS	Chr3	27841637	A-T	HET
SBS	Chr3	33457734	C-A	Homo
SBS	Chr5	3479187	T-G	HET
SBS	Chr5	7657612	A-C	HET
SBS	Chr5	26096456	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g44910
SBS	Chr5	27973918	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os05g48810
SBS	Chr6	24277738	T-C	HET
SBS	Chr6	28518559	T-A	HET
SBS	Chr7	3671859	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g07340
SBS	Chr7	4546356	A-C	HET
SBS	Chr7	21273584	A-G	HET
SBS	Chr7	25312166	A-T	HET
SBS	Chr9	12116076	A-T	HET
SBS	Chr10	6005511	T-C	HET
SBS	Chr10	7019784	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os10g12610
SBS	Chr10	21021072	A-C	HET
SBS	Chr11	21165361	A-T	HET
SBS	Chr12	7733155	G-A	HET
SBS	Chr12	16712073	T-G	HET

Deletions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	1041820	1041833	13	LOC_Os11g02990
Deletion	Chr4	3086156	3086157	1
Deletion	Chr4	5694515	5694529	14
Deletion	Chr1	6315414	6315415	1
Deletion	Chr5	7257803	7257807	4
Deletion	Chr1	9288220	9288225	5
Deletion	Chr10	11542029	11542039	10
Deletion	Chr6	12653514	12653517	3
Deletion	Chr7	16499882	16499883	1
Deletion	Chr12	23838263	23838271	8
Deletion	Chr8	23868325	23868327	2
Deletion	Chr6	26085848	26085849	1
Deletion	Chr7	28392181	28392185	4	LOC_Os07g47490
Deletion	Chr1	29909832	29909841	9
Deletion	Chr3	30082608	30082614	6	LOC_Os03g52410
Deletion	Chr2	31336745	31336780	35
Deletion	Chr1	42761479	42761481	2

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	20580547	20581132	586
Insertion	Chr3	22475639	22475639	1
Insertion	Chr4	6140669	6140669	1
Insertion	Chr8	28089917	28089917	1	LOC_Os08g44700
Insertion	Chr9	5748486	5748486	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	8861708	8861936
Inversion	Chr8	21142715	21143109
Inversion	Chr6	22483105	22521691
Inversion	Chr3	34592583	35181959	LOC_Os03g62090
Inversion	Chr3	34592845	34999733

Translocations: 10

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	748149	Chr11	718022
Translocation	Chr12	748825	Chr7	19332691
Translocation	Chr12	753092	Chr7	19332699
Translocation	Chr9	4104941	Chr4	18885959	LOC_Os09g07980
Translocation	Chr3	8414765	Chr2	15466776	LOC_Os03g15380
Translocation	Chr6	10117993	Chr5	21218472
Translocation	Chr9	11649636	Chr4	18885957
Translocation	Chr8	17299160	Chr4	18885956	LOC_Os08g28350
Translocation	Chr9	18082310	Chr4	18885967
Translocation	Chr5	20828151	Chr4	31852383

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