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Mutant Information

Variant Information

Single base substitutions: 28

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	10324414	C-T	HET
SBS	Chr1	11559019	C-G	HET
SBS	Chr1	34398082	A-G	Homo
SBS	Chr1	42916986	T-A	HET
SBS	Chr1	5431653	A-T	HET
SBS	Chr10	12604490	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os10g24560
SBS	Chr10	4015204	T-G	HET
SBS	Chr10	4504157	A-C	HET
SBS	Chr12	1663899	T-A	Homo
SBS	Chr12	9329176	G-A	HET
SBS	Chr2	20103852	C-T	HET
SBS	Chr2	20537786	G-A	Homo
SBS	Chr2	20895932	T-C	Homo
SBS	Chr2	4068038	A-T	HET
SBS	Chr3	10946295	T-G	Homo
SBS	Chr3	14773412	G-A	HET
SBS	Chr3	15029788	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os03g26280
SBS	Chr3	30377951	C-G	Homo
SBS	Chr4	1139810	T-A	HET
SBS	Chr4	30674154	C-T	HET
SBS	Chr5	19751888	T-C	Homo
SBS	Chr5	5368791	A-T	Homo
SBS	Chr6	23866353	C-T	HET
SBS	Chr6	25228647	T-C	HET
SBS	Chr6	8091913	G-T	HET
SBS	Chr6	994243	T-C	Homo
SBS	Chr7	8444227	G-T	HET
SBS	Chr8	8303236	C-A	Homo

Deletions: 7

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	2067145	2067157	12
Deletion	Chr12	3632266	3632268	2
Deletion	Chr2	7053905	7053906	1
Deletion	Chr4	7268457	7268458	1
Deletion	Chr11	18891978	18891991	13	LOC_Os11g32060
Deletion	Chr12	21041938	21041947	9
Deletion	Chr5	29705001	29799000	93999	14

Insertions: 11

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	19729900	19729900	1
Insertion	Chr10	12849436	12849437	2
Insertion	Chr12	26558701	26558702	2
Insertion	Chr2	26635826	26635860	35
Insertion	Chr2	30538115	30538118	4
Insertion	Chr4	22689646	22689646	1
Insertion	Chr4	45326	45327	2
Insertion	Chr5	15682444	15682446	3
Insertion	Chr5	20168242	20168243	2
Insertion	Chr7	12594231	12594231	1
Insertion	Chr7	4335170	4335179	10

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	26670481	26670695

Translocations: 12

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr4	1513280	Chr3	21846119
Translocation	Chr9	2171228	Chr2	10775862
Translocation	Chr4	5588400	Chr1	25576624
Translocation	Chr8	6303539	Chr1	25605089
Translocation	Chr12	8840168	Chr4	15519175
Translocation	Chr12	10365894	Chr4	32549768	LOC_Os04g54730
Translocation	Chr7	10511348	Chr6	11334670
Translocation	Chr11	16590731	Chr6	27543274	2
Translocation	Chr8	19767131	Chr2	1834005	LOC_Os08g31890
Translocation	Chr12	22623003	Chr11	22169200	LOC_Os11g37540
Translocation	Chr12	23762151	Chr11	16475347	2
Translocation	Chr3	34340303	Chr2	397595	2

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