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Mutant Information

Variant Information

Single base substitutions: 27

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	37316403	G-T	HET
SBS	Chr1	531349	G-A	Homo
SBS	Chr1	77712	G-A	Homo
SBS	Chr1	77722	T-A	Homo
SBS	Chr1	77723	C-A	Homo
SBS	Chr10	18881240	A-G	HET
SBS	Chr10	6459398	A-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g11690
SBS	Chr11	6173333	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os11g11160
SBS	Chr12	8876309	C-T	HET
SBS	Chr2	30898376	T-A	HET
SBS	Chr3	13196030	A-C	HET
SBS	Chr3	3390954	T-G	HET
SBS	Chr3	9807823	G-A	HET
SBS	Chr4	23902451	G-A	HET
SBS	Chr4	9384854	A-G	HET
SBS	Chr5	20021245	C-T	HET
SBS	Chr6	13659469	T-A	HET
SBS	Chr6	1374160	C-T	Homo
SBS	Chr6	19532307	G-A	HET
SBS	Chr6	21689408	G-T	HET
SBS	Chr6	364089	G-A	HET
SBS	Chr7	10963406	T-C	Homo
SBS	Chr7	11579744	G-A	HET
SBS	Chr7	21486847	A-T	HET
SBS	Chr7	21486848	A-T	HET
SBS	Chr7	22099757	T-C	Homo
SBS	Chr8	14517859	G-C	HET

Deletions: 8

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	7043184	7043185	1	LOC_Os10g12630
Deletion	Chr10	7275001	7421000	145999	19
Deletion	Chr9	11179427	11179432	5
Deletion	Chr9	15530999	15531000	1
Deletion	Chr1	27428083	27428084	1
Deletion	Chr4	28716399	28716401	2
Deletion	Chr1	31154267	31154270	3
Deletion	Chr1	36259243	36259251	8

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	1918329	1918329	1
Insertion	Chr11	20878309	20878378	70
Insertion	Chr3	32501030	32501031	2
Insertion	Chr4	1943386	1943386	1
Insertion	Chr4	8749036	8749036	1
Insertion	Chr8	5022341	5022343	3

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2
Inversion	Chr6	13746517	14300030
Inversion	Chr6	13746523	14300039
Inversion	Chr7	26565498	26565605

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	9135217	Chr8	9992196	LOC_Os12g16030
Translocation	Chr12	10174302	Chr4	8429525
Translocation	Chr12	20285023	Chr1	23525059
Translocation	Chr11	23449714	Chr8	16434599

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