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Mutant Information

Variant Information

Single base substitutions: 21

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	3130055	T-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g06640
SBS	Chr2	19543118	A-G	HET
SBS	Chr2	33731218	G-T	HET
SBS	Chr3	12550076	T-A	Homo
SBS	Chr3	24927116	C-T	HET
SBS	Chr3	27675728	C-T	Homo
SBS	Chr4	31707001	C-G	Homo
SBS	Chr5	365857	A-T	HET	STOP_GAINED	LOC_Os05g01610
SBS	Chr5	20250465	C-G	HET
SBS	Chr5	21660756	T-C	HET
SBS	Chr7	456654	G-A	Homo
SBS	Chr7	11615799	C-T	HET
SBS	Chr7	21633734	G-A	HET
SBS	Chr8	1313540	G-A	HET
SBS	Chr8	24435829	C-A	Homo
SBS	Chr10	2229012	G-T	Homo
SBS	Chr11	869433	G-A	HET
SBS	Chr11	8335885	G-A	HET
SBS	Chr11	15739419	G-A	Homo
SBS	Chr11	17620216	C-G	Homo
SBS	Chr12	173384	T-A	HET

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	10399001	10478000	78999	10
Deletion	Chr2	10421906	10421907	1	LOC_Os02g17970
Deletion	Chr4	10481001	10519000	37999	7
Deletion	Chr7	11856803	11856804	1
Deletion	Chr5	13622854	13622858	4
Deletion	Chr9	14622765	14622783	18
Deletion	Chr3	15142099	15142119	20
Deletion	Chr4	15338915	15338921	6	LOC_Os04g26310
Deletion	Chr3	16783494	16783495	1
Deletion	Chr6	19406001	19420000	13999	3
Deletion	Chr11	20132310	20132311	1
Deletion	Chr12	23869470	23869471	1
Deletion	Chr2	27899342	27899348	6	LOC_Os02g45800
Deletion	Chr3	31480488	31480500	12	LOC_Os03g55340
Deletion	Chr1	39826851	39826860	9

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr8	27109526	27109529	4
Insertion	Chr11	25405880	25405881	2
Insertion	Chr2	11590335	11590366	32

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	19396763	19405615	LOC_Os06g33320

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	19030375	Chr11	28433553	LOC_Os11g47290
Translocation	Chr11	27806918	Chr6	9599987	LOC_Os11g45960

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