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Mutant Information

Variant Information

Single base substitutions: 25

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	24377151	T-C	HET
SBS	Chr1	37709819	C-A	HET
SBS	Chr2	20696147	G-A	HET
SBS	Chr2	33839282	C-G	HET
SBS	Chr3	17748288	G-A	HET
SBS	Chr3	18117882	G-A	HET
SBS	Chr3	36295792	G-A	Homo
SBS	Chr4	12532939	A-G	HET
SBS	Chr4	27976936	C-T	HET
SBS	Chr4	27976937	A-T	HET
SBS	Chr4	33037971	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g55530
SBS	Chr6	17782892	A-T	HET
SBS	Chr6	28226271	T-A	Homo
SBS	Chr6	28242007	A-G	Homo
SBS	Chr7	11489776	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g19420
SBS	Chr7	18354825	A-T	HET
SBS	Chr9	4621560	A-G	Homo
SBS	Chr10	5040174	C-A	HET
SBS	Chr11	21445725	G-A	Homo
SBS	Chr12	2929201	G-T	HET
SBS	Chr12	2929206	C-T	HET
SBS	Chr12	4535721	A-G	HET
SBS	Chr12	21475947	C-T	HET
SBS	Chr12	21841571	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g35840
SBS	Chr12	25012365	C-T	HET

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	112233	112252	19	LOC_Os09g01100
Deletion	Chr1	1819920	1819922	2
Deletion	Chr1	4187174	4187175	1
Deletion	Chr5	4380150	4380152	2
Deletion	Chr7	8330097	8330103	6
Deletion	Chr2	11502685	11502694	9
Deletion	Chr8	12438142	12438158	16
Deletion	Chr11	12998861	12998862	1	LOC_Os11g22600
Deletion	Chr11	19498192	19498193	1
Deletion	Chr7	21491497	21491502	5
Deletion	Chr3	28294462	28294484	22
Deletion	Chr2	28403001	28418000	14999	LOC_Os02g46580
Deletion	Chr3	28508531	28508535	4
Deletion	Chr4	29620249	29620250	1
Deletion	Chr3	31233354	31233355	1

Insertions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	2352050	2352050	1	LOC_Os05g04890
Insertion	Chr2	22192623	22192623	1
Insertion	Chr3	34863825	34863853	29
Insertion	Chr4	3903077	3903077	1
Insertion	Chr4	26842513	26842513	1
Insertion	Chr5	2235162	2235162	1	LOC_Os05g04730
Insertion	Chr6	14244748	14244751	4
Insertion	Chr7	7461825	7461825	1
Insertion	Chr9	14315063	14315066	4
Insertion	Chr10	10199189	10199189	1
Insertion	Chr11	19416435	19416440	6
Insertion	Chr11	21228297	21228297	1
Insertion	Chr12	5626711	5626711	1
Insertion	Chr12	17433083	17433096	14	LOC_Os12g29360

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	10088811	10224791
Inversion	Chr10	12195640	12216410	LOC_Os10g23820

Translocations: 12

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	451053	Chr2	28404060	LOC_Os02g46580
Translocation	Chr11	451360	Chr2	28417873
Translocation	Chr9	2592230	Chr7	27101180	LOC_Os07g45430
Translocation	Chr12	2959719	Chr2	11267491	2
Translocation	Chr4	4674255	Chr1	5261384	LOC_Os01g10090
Translocation	Chr4	4674913	Chr1	5261389	2
Translocation	Chr11	7158251	Chr8	20379610
Translocation	Chr9	8086301	Chr5	11371628
Translocation	Chr9	10385347	Chr6	13546816
Translocation	Chr3	19118830	Chr1	17033381
Translocation	Chr12	24606997	Chr5	2957608
Translocation	Chr4	29209418	Chr2	24568877

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